KEGG   Metapseudomonas otitidis: PtoMrB4_05450
Entry
PtoMrB4_05450     CDS       T06890                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
poj  Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:poj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:poj03000]
    PtoMrB4_05450
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:poj02044]
    PtoMrB4_05450
Transcription factors [BR:poj03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PtoMrB4_05450
Secretion system [BR:poj02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PtoMrB4_05450
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_lid_14 HTH_8 GAF_2 HTH_30 HTH_50 AAA_5 AAA_2 AAA_16 AAA GAF HTH_28 GAF_3 Torsin AAA_7
Other DBs
NCBI-ProteinID: BCA26568
UniProt: A0A679GE05
LinkDB
Position
complement(575307..576818)
AA seq 503 aa
MFAQMPQPLDYAETLLGQYDRLVGLSDSDELLGSFVGAAAELSGCELAQLYLLDAARTHL
GLTAEYLEPRLQPRDRATLPADYHDQQLLQYSLCQGQPLALAELNPGLHDTSFLPEEGGP
WRALLCLPLRAHQGAIRGLLLCATRQARELAAFTGSLERMGRLMLAQLDLFQRLQPAARG
DSSRSTTPRPCARGFGLIGESKVMRQTYRLIGKVLHSPYTVLIHGETGTGKELVARAIHD
HGPRREAPFIVQNCSALPEQLLESELFGYRKGAFTGADADREGLLDAANGGTLFLDEIGD
MPLALQAKLLRVLQEGEVRPLGTPHPHRIDVRIIAATHRDLQAMITAGEFREDLFYRLCQ
FPIELPPLRQRGEDIPHLARHFANQACRFLQRSPCLWSEEALERLARHPFPGNVRELKAL
VERAVLLCDGELLPSHFSLRGTPLPSGQPLSLRERLDHYERGQLIDALRRHDGNRAQAAR
ELGLPRRTLLYRMDRLGIGTADL
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgtttgcgcagatgccgcagccgctcgactacgccgaaaccctgctcgggcagtacgac
cggctcgtcgggctgagtgacagcgacgaactgctgggcagcttcgtcggcgccgccgcc
gaactgagcggctgcgaactggcgcagctctacctgctggacgcggcgcgtacgcacctg
gggctgacggcggaatacctcgaaccccgcctgcaaccccgggaccgcgccaccctgccc
gccgactaccacgaccagcagctgctgcagtacagcctgtgccagggccagcccctcgcc
ctggcagaactcaacccgggcctgcacgacaccagctttctccccgaggaaggcggcccc
tggcgggcgctgctgtgcctgcccctgcgggcgcaccagggcgccattcgcggcctgctg
ctctgcgccacccgccaggcccgcgaactggcggccttcaccggctcgctggagcgcatg
ggccgtctcatgctggcccagctcgacctgttccagcggttgcagcctgccgcccgtggc
gacagctctcgcagcacaacgccccgcccctgcgcgcgcggtttcggcctgatcggcgag
agcaaggtgatgcgccagacctaccgcctgatcggcaaggtcctgcacagcccctacacc
gtgctcatccacggcgagacgggcaccggcaaggagctggtggcccgcgcgatccacgac
cacggcccaaggcgggaagcccccttcatcgtgcagaactgctcggccctgccggagcag
ttgctggaaagcgaactgttcggctaccgcaagggcgccttcaccggcgccgacgcggac
cgcgaagggctgctggatgcggcgaacggcggcacgctgttcctcgacgagatcggcgac
atgcccctggcgctccaggccaagctgctgcgggtactgcaggaaggcgaagtccgcccg
ctgggcacgccccacccgcaccggatcgacgtgcgcatcatcgccgccacccaccgtgac
ctgcaggccatgatcaccgccggcgagttccgcgaagacctgttctaccggctgtgccag
ttccccatcgaattgccgccgctgcgccagcggggcgaagacatcccccacctcgcgcgc
cacttcgccaaccaggcctgccgctttctccagcgctcgccgtgcctgtggtcggaggag
gcgctggagcgactggcccggcaccccttcccaggcaacgtgcgcgagctgaaggccctg
gtggagcgtgccgtgctgctctgcgacggcgagctgctgccgtcccacttcagcctgcgt
ggcacgcccctgcccagcgggcagcccctgagcctgcgtgagcgcctcgaccactacgag
cgcggccaactgatcgacgccctgcgccgccacgacggcaaccgtgcacaggcagcccgc
gagctgggcctgccccgccgcaccctgctttaccgcatggaccgcctcggcatcggcacg
gcggatctctga

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