Metapseudomonas otitidis: PtoMrB4_06890
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Entry
PtoMrB4_06890 CDS
T06890
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
poj
Metapseudomonas otitidis
Pathway
poj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PtoMrB4_06890 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_06890 (uvrA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PtoMrB4_06890 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PtoMrB4_06890 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
nSTAND1
AAA_23
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
AAA_21
cobW
Zn_ribbon_8
AAA_25
ScfRs
Motif
Other DBs
NCBI-ProteinID:
BCA26712
UniProt:
A0A679GCU6
LinkDB
All DBs
Position
complement(727136..729970)
Genome browser
AA seq
944 aa
AA seq
DB search
MDQILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGTPRC
PDHDVPLEAQTVSQMVDQVLAMPEGRKLMLLAPVIRERKGEHLAVFDELRAQGFVRARVN
GRLYELDELPKLDKQKKHSIDVVVDRFKVRGDLQQRLAESFETAINLADGIALVAPMDDE
PGEEIIFSARFACPHCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDAKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFDDLAPEHQRVILQGSGREDVDFRYL
NDRGDIVKRSHPFEGIVPNLERRYRETESNTVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTGLPVGEASDYFGVLELPGRKGEIAAKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLATLTHLRNLGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGRIVAEGTPDEVMAHPDSLTGKYLSGRVKIEVP
ATRTPRDKKKSLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPITATA
LNGATTLEAAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYK
GRSITEVLDMTIEEARQFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIATGTPEEVAAMPQSHTGHFLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagatactcatccgtggggcacgtacccacaacctgaagaacgtcgacctcacc
ctcccccgcgacaagctcatcgtgatcaccgggctgtccggttcgggcaagtcgtccctg
gcgttcgacacgctctacgccgagggccagcggcgctatgtggaatcgctgtcggcctat
gcccggcagttcctgtcgatgatggaaaagcccgatgtggacaccatcgaggggctgtcg
ccggccatctccatcgagcagaaatccaccagccacaacccccgttccacggtgggcacc
atcaccgagatctacgactacctgcgcctgctctacgcacgcgccggtacgccgcgctgc
ccggaccacgatgtgccgctggaggcgcagaccgtgagccagatggtcgaccaggtgctg
gccatgcccgagggccgcaagctgatgctgctggcgccggtgatccgcgagcgcaagggc
gagcacctggcggtgttcgacgaactgcgcgcccagggcttcgtccgcgcacgggtcaac
ggccgcctctacgagctggacgagctgcccaagctggacaagcagaagaagcactccatc
gatgtggtggtggaccgcttcaaggtgcgcggcgacctgcagcagcgcttggcggaatcc
ttcgagacggcgatcaacctcgccgacggcattgcgctggtggcgccgatggacgacgag
ccgggcgaggagatcatcttctccgcgcgcttcgcctgcccccattgcggccactccatc
agcgagctggaacccaagctgttctccttcaacaacccggccggtgcctgcccgacctgc
gatggcctgggggtgaagcagttcttcgatgccaagcgcctggtcaacggcgagctgacc
ctggccgaaggcgcgatccgcggctgggaccggcgcaacgtctattacttccagatgctc
ggctccctggccgcgcactatggcttcagcctggaggagccgttcgacgacctggcgccg
gagcaccagcgggtgatcctgcagggcagcggccgcgaggacgtggacttccgctacctc
aacgaccgtggcgacatcgtcaagcgctcccaccccttcgagggcatcgtcccgaacctg
gagcggcgctaccgcgagaccgaatccaacaccgtgcgcgaggagctggcgaagttcctc
agcacccagccctgcccggattgccggggcacccgcctgcgccgcgaggcgcgtcatgtg
tgggtcggcgagaagacgctgccggcagtgaccggcctgccagtgggcgaggcctcggac
tacttcggcgtgctggagctgccggggcgaaagggcgagatcgcggcgaagatcctcaag
gagatccgcgagcgcctgcagttcctggtgaacgtcggcctggactacctgaccctggac
cgcagcgccgacaccctctccggtggcgaggcccagcgtatccgcctggccagccagatc
ggtgccggcctggtgggggtgatgtacatcctcgacgagccgtccatcggcctgcaccag
cgtgacaacgagcgcctgctggccaccctcacccacctgcgcaacctgggcaacacggtg
atcgtggtcgagcacgacgaggacgccatccgcctggccgactatgtggtggacatcggc
ccgggtgccggcgtgcatggcggccggatcgtcgccgaaggcacgccggacgaggtgatg
gcccacccggattcgctcaccggcaagtacctgtcgggtcgggtgaagatcgaggtgccg
gccacccgcacgccccgggacaagaagaagtcgctgaagctcaagggcgcgcgcggcaac
aacctgcgcaacgtcgacctggagatcccggtcggcctgctgacctgcatcaccggcgtg
tccggctcgggcaagtcgacgctgatcaacaacaccctgttccccatcaccgcgacggcg
ctgaacggtgcgaccaccctggaggcagccccccacgacagcttcgacgggctgcagcac
ctggacaaggtggtggacatcgaccagagccccatcggccgtacgccgcgctccaacccg
gcgacctacaccgggctgttcacgccgatccgtgaactgttcgcgggcgtgccggagtcc
cgctcgcggggctacgggccgggccgtttctccttcaacgtgaagggcggccgctgcgag
gcctgccagggcgacggcgtgatcaaggtggagatgcacttcctgccggacatctacgtg
ccgtgcgacgtgtgcaagggcaagcgctacaaccgcgaaaccctggaggtgaagtacaag
ggccgcagcatcaccgaggtgctggacatgaccatcgaggaggcgcgccagttcttcgat
gccgtgccggccatcgcccgcaagctgcagacgctgatggacgtgggcctttcgtacatc
cgcctggggcagtcggcgaccaccctctccggcggggaggcgcagcgggtgaagctgtcc
cgcgagctgtccaagcgcgacaccggcaagacgctgtacatcctcgacgagcccaccacg
ggcctgcacttcgccgacatccagcaactgctggacgtgctgcaccggctgcgggaccac
ggcaacacggtggtggtcatcgagcacaacctggacgtgatcaagaccgccgactggctg
gtggacctgggcccggaaggcggttccaagggcggccagatcatcgccaccggtacgccg
gaggaggtggcggcgatgccgcagtcccacacggggcacttcctcaagccgttgctggag
cgcgaccgcgcctga
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integrated database retrieval system
