Metapseudomonas otitidis: PtoMrB4_09410
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Entry
PtoMrB4_09410 CDS
T06890
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03030
DNA replication
poj03430
Mismatch repair
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtoMrB4_09410 (holA)
03430 Mismatch repair
PtoMrB4_09410 (holA)
03440 Homologous recombination
PtoMrB4_09410 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poj03032
]
PtoMrB4_09410 (holA)
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_09410 (holA)
Enzymes [BR:
poj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PtoMrB4_09410 (holA)
DNA replication proteins [BR:
poj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PtoMrB4_09410 (holA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PtoMrB4_09410 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
HP_1247_M
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BCA26964
UniProt:
A0A679GLU6
LinkDB
All DBs
Position
complement(1001299..1002369)
Genome browser
AA seq
356 aa
AA seq
DB search
MRDRAAGQPSPMKLNAAQLSKHLQGNLAPVYVVSGDEPLLCQEACDAIRSACRARDFSER
QVFNAENNFDWGLLLEAGASLSLFAERRLIELRLPSGKPGDKGAAALMEYLARPPEDTVL
LVSLPKLDGSTQKTKWAKALIDGADAQFIQIWPVDAHQLPQWIRQRMAQAGLAASQEAVD
LIAARVEGNLLAAAQEIEKLKLLAEGAQVDAATVQAAVADSARFDVFGLIDAALNGEAAH
TLRTLEGLRGEGVETPVILWALARELRQLAGIAQQYAQGVPLEKAFASARPPIWDKRRPL
VSRALQRHPASRWNQLLADAQRIDAQIKGQAPGDPWIGLAHLALSLAGQRLPIPAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgatcgcgccgccgggcagccctcccccatgaagctcaacgccgcccagctcagc
aagcacctgcaaggcaacctcgcccccgtctatgtcgtcagcggtgacgagcccctgctc
tgccaggaagcctgcgacgccatccgcagcgcctgccgcgcccgcgacttcagcgagcgc
caggtgttcaacgccgagaacaacttcgactggggcctgctgctggaggccggagccagc
ctgtcgctgttcgccgagcgccgcctgatcgagctgcgcctgccctccggcaagcctggc
gacaagggcgcagcagccctgatggaatacctggcccgaccgccggaagacaccgtcctg
ctggtcagcctgcccaagctggatggcagcacgcagaagaccaaatgggccaaggccctg
atcgacggcgcggacgcccagttcatccagatctggccggtggacgcccaccagctgccc
cagtggatccgccagcgcatggcccaggccggcctggccgcgagccaggaagcggtggac
ctgatcgccgcccgggtggaaggcaacctgctggccgctgcccaggagatcgagaagctc
aagctgctcgccgaaggtgcccaggtggatgccgccacggtccaggcggccgttgccgac
agcgcccgtttcgatgtcttcggcctgatcgacgccgcactcaacggcgaagccgcgcac
accctgcgcaccctcgaaggcctgcggggcgaaggggtggaaaccccggtgatcctctgg
gccctcgcccgtgagctgcgccagctggccggcatcgcccagcagtacgcccagggcgtc
ccgctggagaaagccttcgcctcggcccgcccccccatctgggacaagcgccgccccctg
gtcagccgcgccctgcaacgccacccggcctcgcgctggaaccagctgctcgccgatgcc
cagcgcatcgacgcgcagatcaagggccaggcacccggcgatccgtggatcggcctggca
cacctggcactcagcctcgccggccagcgcctgcccatccccgccgcctga
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