Metapseudomonas otitidis: PtoMrB4_10040
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Entry
PtoMrB4_10040 CDS
T06890
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poj03016
]
PtoMrB4_10040 (trmA)
Enzymes [BR:
poj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PtoMrB4_10040 (trmA)
Transfer RNA biogenesis [BR:
poj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PtoMrB4_10040 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
Methyltransf_4
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
RrnaAD
PrmA
DREV
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
BCA27027
UniProt:
A0A679GJW0
LinkDB
All DBs
Position
complement(1064218..1065345)
Genome browser
AA seq
375 aa
AA seq
DB search
MARPDPQSECPMSRPQFDPSTYAAQLAEKTERLKALLAPFDAPEPTVFDSPREHYRLRAE
FRLWRETGNENRHYAMFEAGDKFTPVLIEDFPIASRRINELMPRLKAGWQASQVLSFKLF
QVEFLTTLSGDALITLCYHRPLDDAWKAEAETLAADLGVSLVGRSKGKRIVIGRDYVEEE
LTVAGRAFRYRQPEGAFTQPNGEVCQKMLAWAFEAMGERQDDLLELYCGNGNFTLPLATR
ARQVLATEISKTSVNAALANLADNGVDNVTLVRLSAEELTEALNEVRPFRRLAGIDLKGY
AFGTVFVDPPRAGMDPDTCELTRRFERILYISCNPETLAANIAQLHDTHRIERCALFDQF
PYTHHMESGVLLVRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccccgatccccagagtgaatgccccatgagccgcccgcagttcgacccgtcc
acctatgccgcccagcttgccgagaagaccgagcgcctgaaggccctgctggcgcccttc
gatgcgccggaaccgacggtgttcgactccccccgcgagcactaccgcctgcgcgccgag
ttccgcctgtggcgcgagaccggcaacgagaaccgccactacgcgatgttcgaggccggc
gacaagttcaccccggtgctgatcgaggacttccccatcgccagccgccgcatcaacgag
ctgatgccgcgcctgaaagccggctggcaggcaagccaggtgctgtcgttcaagctgttc
caggtggagttcctcaccaccctgtcgggcgacgcgttgatcaccctctgctaccaccgc
cccctggacgatgcctggaaggccgaggccgagacgctcgccgccgacctgggcgtgagc
ctggtgggccgttccaagggcaagcgcatcgtcatcggccgcgactacgtggaagaggag
ctgaccgtcgccggtcgcgccttccgctaccgccagcctgagggcgccttcacccagccc
aacggcgaggtgtgccagaagatgctggcctgggccttcgaggcaatgggcgagcgccag
gacgacctgctggagctgtactgcggcaacggcaacttcaccctgcccctggccacccgc
gcccgccaggtgctggccaccgagatcagcaagacctcggtcaacgccgccctggccaac
ctcgccgacaacggcgtggacaacgtgaccctggtgcgcctctccgccgaggagctgacc
gaggccctcaatgaagtgcggcccttccgccgcctggccggcatcgacctcaagggctac
gcgttcggcaccgtgttcgtcgacccgccccgcgccggcatggacccggacacctgcgag
ctgacccgccgcttcgagcgcatcctctacatctcctgcaacccggagaccctggccgcc
aacatcgcccagctgcacgacacccaccgcatcgagcgctgcgccctgttcgaccagttc
ccctacacccaccacatggaatccggcgtgctgctggtacgccgctga
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