Metapseudomonas otitidis: PtoMrB4_10310
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Entry
PtoMrB4_10310 CDS
T06890
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_10310 (radA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PtoMrB4_10310 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
RecA_N
AAA
SLFN-g3_helicase
Rad51
nSTAND3
nSTAND_NTPase5
NTPase_1
AAA_14
AAA_24
MCM
NB-ARC
AAA_5
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BCA27054
UniProt:
A0A1I0UPZ6
LinkDB
All DBs
Position
1090507..1091874
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGSTFPKWAGQCADCGAWNTLVETVVEGAAASSSSGRAGWAGGQAQIK
TLAEVSVEEMPRFSTASAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRFP
ALYVTGEESQQQVAMRARRLGLPEDKLKVMTETCIESIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEAVPGSVVMATW
EGSRPMLVEVQALVDTSHLANPRRVTLGLDPNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALIAAIMSSLRNRPLEHDLLVFGEVGLSGEVRPVPSGQERLKEAGKHGF
KRAIVPKGNAPKEAPPGLRVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggctcgaccttccccaaatgg
gctggccagtgtgccgattgcggggcctggaacaccctggtggaaaccgtggtggaaggg
gctgccgcctcgtcctccagcgggcgcgccggctgggccggcggccaggcgcagatcaag
accctggccgaggtcagcgtcgaggagatgccgcgcttctccaccgcttcggccgaactg
gaccgggtgctcggtggcggtctggtcgacggttcggtggtgctgatcggcggtgacccc
ggcatcggcaagtccaccatcctcctgcagaccctctgcaacatcgccacccgcttcccc
gcgctctacgtcaccggtgaggaatcccagcagcaggtcgccatgcgcgcccgtcgcctc
gggctgcccgaggacaagctcaaggtgatgaccgagacctgcatcgaaagcatcatcgcc
accgcgcgggtggagaagcccaaggtgatggtgatcgactccatccagaccatcttcacc
gagcagttgcagtccgctcccggcggcgtggcccaggtgcgcgagagcgccgcgctgctg
gtgcgctacgccaagcagagcggcacggcgatcttcctggtcggccacgtgaccaaggag
ggcgccctggcaggcccccgcgtgctggagcacatggtcgacacggtgctgtatttcgag
ggcgagtccgacggccgactgcgcctgctgagggcggtgaagaaccgcttcggcgcggtg
aacgagctgggcgtgttcggcatgaccgatcgcggcctgaaggaggtttccaacccctcg
gcgatcttcctcacccgcgcccaggaagccgtgcccggcagcgtggtgatggccacctgg
gaaggctcgcgaccgatgctggtagaggtgcaggcactggtggacaccagccacctggcc
aacccgcgccgggtcaccctgggcctggacccgaaccgcctggcgatgctgctggcagtg
ctgcaccgccacggcggcatccccacccatgaccaggatgtgttcctcaacgtggtgggc
ggggtgaaggtgctggagacggcctccgacctggcgctgatcgccgccatcatgtcgagc
ctgcgcaaccggccgctggagcatgacctgctggtgttcggcgaggtgggcctgtctggc
gaggtgcgcccggtgcccagtgggcaggagcgtctgaaggaggcgggcaagcatggcttc
aagcgggccatcgtgcccaaggggaacgccccgaaagaggcgccccccggcttgcgggtc
atcgcagtgacgcgcctggagcaggcgctcgacgcgctgttcgagtag
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