Metapseudomonas otitidis: PtoMrB4_10420
Help
Entry
PtoMrB4_10420 CDS
T06890
Symbol
glyA2
Name
(GenBank) serine hydroxymethyltransferase 3
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00260
Glycine, serine and threonine metabolism
poj00460
Cyanoamino acid metabolism
poj00630
Glyoxylate and dicarboxylate metabolism
poj00670
One carbon pool by folate
poj00680
Methane metabolism
poj01100
Metabolic pathways
poj01110
Biosynthesis of secondary metabolites
poj01120
Microbial metabolism in diverse environments
poj01200
Carbon metabolism
poj01230
Biosynthesis of amino acids
poj01240
Biosynthesis of cofactors
poj04981
Folate transport and metabolism
Module
poj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PtoMrB4_10420 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
PtoMrB4_10420 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PtoMrB4_10420 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PtoMrB4_10420 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PtoMrB4_10420 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PtoMrB4_10420 (glyA2)
Enzymes [BR:
poj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PtoMrB4_10420 (glyA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCA27065
UniProt:
A0A679GA64
LinkDB
All DBs
Position
complement(1104414..1105667)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGITDAGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVLKNAQTMAGV
FIERGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILENMGDESVVDRVREQVKAICAKFPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgaactcttcgccgcgatggag
caggaagcccagcgccaggaagagcacatcgaactcatcgcctcggagaactacaccagc
ccggcggtgatggaagcccagggtagcgtgctgaccaacaaatacgccgagggttacccg
ggcaagcgctactacggcggttgcgagtacgtcgacgtggtcgagcagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccccacgccggttcccag
gccaacgccgccgtctacctggccctgctgtcggccggtgacaccatcctcggcatgagc
ctggcccacggtggccacctcacccacggcgcctccgtctcctcctccggcaagctgtac
aacgccgtgcagtacggcatcaccgacgccggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgctggcttctccgcctactcccaggtg
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtggccggcctggtcgccgccggtgtgtacccgaacccggtgccgttcgcc
gatgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttccccggcgcccag
ggtggcccgctggaacacgtgatcgccgccaaagccgtgtgcttcaaggaagccctgcag
cccgagttcaaggcctaccagcagcaggtcctgaagaacgcccagaccatggctggcgtg
ttcatcgaacgcggcttcgacgtggtctccggtggcacccagaaccacctgttcctgctg
tccctgatcaagcaggacatcaccggtaaggacgcagacgccgccctgggtcgcgcattc
atcaccgtgaacaagaacagcgtgcccaacgacccgcgctcccccttcgtcacctccggc
ctgcgcatcggcacccccgccgtgaccacccgtggtttcaaggaagccgagtgccgcgaa
ctggccggctggatctgcgacatcctggagaacatgggcgacgagtccgtggtcgaccgc
gtgcgcgagcaggtcaaggccatctgcgccaagttcccggtgtacggcaactga
DBGET
integrated database retrieval system
