Metapseudomonas otitidis: PtoMrB4_10590 Help Entry PtoMrB4_10590     CDS       T06890                                  Symbol rtcB_1 Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism poj  Metapseudomonas otitidis Brite KEGG Orthology (KO) [BR:poj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:poj03016]     PtoMrB4_10590 (rtcB_1) Enzymes [BR:poj01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      PtoMrB4_10590 (rtcB_1) Transfer RNA biogenesis [BR:poj03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     PtoMrB4_10590 (rtcB_1)  Prokaryotic type    tRNA splicing ligases     PtoMrB4_10590 (rtcB_1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB DUF4514 Motif Other DBs NCBI-ProteinID:  BCA27082 UniProt:  A0A679GDP2 LinkDB All DBs Position complement(1127907..1129130) Genome browser AA seq 407 aa AA seqDB search MEKHYNLLEVANGKPIKLWTQGVPVEDDARKQLINTAKMPFIFKHLAVMPDVHLGKGSTI GSVIPTVGAIIPAAVGVDIGCGMIAARTSLMASDLPDNLSGLRSAIEKAVPHGRSPARGG RDKGSWEDVPELADHAWSALAGRFKVITDKYPRLEKTNNRKHLGTLGTGNHFIEVCLDEA QRVWFMLHSGSRGVGNAIGSLFIELAQADMRQHIANLPDRDLAYFEEGSQHFDDYVEAVG WAQDFAKQNRALMMHAVIAAARTVIKKPFEANLEAVNCHHNYVQKEQHFGQEVLVTRKGA VSAQKGQLGIIPGSMGARSFIVRGLGNEEAFCSCSHGAGRTMSRTKAKKLFTVDDQIRAT AHVECRKDEDVIDEIPMAYKDIDAVMHAQRELVEVVHTLRQVVCVKG NT seq 1224 nt NT seq  +upstreamnt  +downstreamnt atggaaaagcactacaacctgctggaagtcgccaacggcaaaccgatcaagctctggacc cagggcgtaccggtggaggacgacgcgcgcaagcaactgatcaacaccgcgaagatgccc ttcatcttcaagcacctggccgtgatgccggacgtgcacctgggcaaggggtcgaccatc ggcagcgtgatccccaccgtcggcgccatcatcccggccgccgtgggtgtggacatcggt tgcgggatgatcgccgcacgcacctcgctgatggcttccgacctgccggataacctgtcc ggcctgcgcagcgccatcgagaaggccgtgccccacggtcgtagccccgctcgcggtggc cgagacaaggggtcctgggaagacgtgccggagctggcggaccacgcctggtcggccctg gccgggcgcttcaaggtgatcaccgacaagtacccgcgcctggagaagaccaacaaccgc aagcacctgggaaccctgggaaccggcaaccacttcatcgaggtctgcctggacgaggcc cagcgcgtctggttcatgctccacagcggatcgcgtggtgtgggtaacgccatcggcagc ctgttcatcgaactggcccaggccgatatgcgccagcacatcgccaacctgccggaccgc gacctggcctacttcgaagaaggcagccagcacttcgacgactacgtggaggccgtgggc tgggcccaggacttcgccaagcagaaccgcgcactgatgatgcacgccgtgatcgcggcg gcgcgtacggtgatcaagaaacccttcgaggccaacctggaagcggtgaactgccaccac aactacgtgcagaaggagcagcacttcggccaggaagtcctggtgacccgcaagggtgcg gtatcggcgcagaagggccagctgggcatcatcccgggctccatgggcgcgcgcagcttc atcgtgcgcggcctgggtaacgaggaggcgttctgctcctgcagccacggcgccggccgc accatgagccgtaccaaggcgaagaaactgttcaccgtggacgaccagatccgcgccacc gcccatgtggaatgccgcaaggacgaggacgtgatcgacgagatccccatggcctacaag gacatcgacgccgtgatgcacgcccagcgcgagctggtggaagtggtgcataccctgcgt caggtggtctgcgtgaaaggatga

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