Metapseudomonas otitidis: PtoMrB4_12440
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Entry
PtoMrB4_12440 CDS
T06890
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00470
D-Amino acid metabolism
poj00550
Peptidoglycan biosynthesis
poj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PtoMrB4_12440 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PtoMrB4_12440 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poj01011
]
PtoMrB4_12440 (murD)
Enzymes [BR:
poj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PtoMrB4_12440 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
poj01011
]
Precursor biosynthesis
Amino acid ligase
PtoMrB4_12440 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BCA27267
UniProt:
A0A679GKM7
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Position
1328963..1330309
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLARQGVPFAVADTRENPPELATLRLQFPQVEVRCG
ELDVEFLCRAQELYVSPGLALATPALQEAAKRGVKLSGDIELFARHAKAPIVAITGSNAK
STVTTLVGDMARAAGKRVAVGGNLGTPALDLLADDIELYVMELSSFQLETTERLNAEVAT
VLNVSEDHMDRYADMQAYHLAKHRIFRGARQVVVNRGDALSRPLVADQLPCWSFGLNKPD
FKAFGLIEEDGEKYLAYQFEKLMPVRELKVRGAHNQANALAALALGHAVGLPFEPMLAAL
REFTGLAHRCQWVRELRGVAYYDDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGAD
FSGLTAPVARYCRAVVLLGRDAELIAAALGDAVPLVRVKTLDEAVQRCAELAQEGDAVLL
SPACASLDMFKNFEERGRLFAQAAEGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatcgcttccgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgcttcctggcgcgccagggcgtgccgttcgcggtcgccgacacccgcgag
aacccgccggagctggcgacgctgcgcctccagttcccgcaggtcgaagtgcgttgcggc
gagctggacgtggagttcctctgccgcgcgcaggagctgtacgtgagccccggactggcc
ctcgccaccccggccctgcaggaagcggccaagcgcggtgtgaagttgtcgggcgacatc
gaattgttcgcccgccacgccaaggcgcccatcgtcgcgatcaccggctccaacgccaag
agcaccgtcaccaccctggttggggacatggcgcgcgcggccggcaagcgggttgcggtg
ggaggaaacctcggtacgccggcgctggacctgttggccgatgacatcgagctgtacgtg
atggagctgtccagcttccagctggaaaccaccgagcggctgaatgccgaggtggccacg
gtgctcaacgtcagcgaagaccatatggaccgctacgccgacatgcaggcctatcacctc
gccaagcaccgcatcttccgtggcgcccgccaggtggtggtgaaccgtggcgatgcgctg
tcccgcccgctggtggccgaccagctgccgtgctggagcttcggcctgaacaagccggat
ttcaaagccttcggcctcattgaggaagacggcgagaagtacctggcctaccagttcgag
aagctcatgccggtgcgtgagctcaaggtccgtggcgcccataaccaggccaacgccctg
gcagccctggcgctgggccatgccgtcggcctgccgttcgagccgatgctggctgcactg
cgggagttcaccggcctcgctcaccgttgccagtgggttcgcgagctgcgtggcgtggcc
tactacgacgactccaaggccaccaatgtcggtgcggccctggctgccatcgaaggcctg
ggggccgacatcgacggcaagctggtgctgattgccggtggggatggcaagggggccgat
ttctccggcctgaccgctccggttgcacgctactgccgcgccgtggtcctgctggggcgc
gatgccgagttgatcgcggccgccctgggcgacgcagtgccgctggtccgcgtgaagacc
ctcgatgaggccgtgcagcgttgcgccgagctggcccaggaaggggacgcggtgctgctg
tcgcccgcctgcgccagcctcgacatgttcaagaacttcgaagaacgcgggcgcctcttc
gcccaggccgcggaggggctgtcctga
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