Metapseudomonas otitidis: PtoMrB4_12480
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Entry
PtoMrB4_12480 CDS
T06890
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00470
D-Amino acid metabolism
poj00550
Peptidoglycan biosynthesis
poj01100
Metabolic pathways
poj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PtoMrB4_12480 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PtoMrB4_12480 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PtoMrB4_12480 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poj01011
]
PtoMrB4_12480 (ddlB)
Enzymes [BR:
poj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PtoMrB4_12480 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
poj01011
]
Precursor biosynthesis
Amino acid ligase
PtoMrB4_12480 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATP-grasp_5
GARS_A
ATPgrasp_YheCD
RimK
TTL
Motif
Other DBs
NCBI-ProteinID:
BCA27271
UniProt:
A0A679G985
LinkDB
All DBs
Position
1334034..1334981
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AA seq
315 aa
AA seq
DB search
MTDHLKSTVPPSAFGRVAVLYGGRSAEREVSLKSGSMVLEALLSAGVDAFGIDVGDDFLQ
RLSSERIDRAFIVLHGRGGEDGSMQGLLECLGIPYTGSGVLASALAMDKLRTKQVWHSLG
LPTPRHAVLASVEDCERAARELGFPLIVKPAHEGSSIGMAKVEDVDALVNAWRDASRYDP
QVLVEQWIHGPEFTIAVLRGEVLPPIRLGTPHTFYDYEAKYLASDTRYQIPCGLDAEKEA
ELKSLTALACEAVGTQGWARADVMQDAEGRFWLLEVNTVPGMTDHSLVPMAARAVGLDYQ
QLVLAVLADSVEARG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatctgaaatccaccgttccgccgagcgcgttcggccgtgtggcggtgctc
tacgggggccgcagcgcggagcgcgaggtgtccctgaagtccggctccatggtgctggag
gccttgctgtcggcaggtgtcgatgccttcgggatcgacgtcggcgacgacttcctgcaa
cgcctgtcgagcgagcgcatcgatcgtgcgttcatcgtcctacatgggcggggcggcgag
gatggcagtatgcagggcctgttggagtgcctgggtattccgtataccggcagtggcgta
ctggcgtcggcactggcgatggacaagctgcgcaccaagcaggtctggcacagccttggc
ctgcccacgccgcgtcacgccgtgctggcaagcgtcgaggattgtgagcgcgctgcgagg
gaactgggcttcccgttgatcgtcaaaccggcccatgaaggttcgagtatcggcatggcc
aaggtggaagacgtcgacgcgctggtgaatgcctggcgtgacgccagccgctacgacccc
caggtgctggtggagcaatggatccacggccccgagttcaccatcgccgtgctgcgtggc
gaggtgctgccgcccatccggctggggactccgcacactttctatgactacgaggccaag
tacctggccagcgatacccgctaccagatcccctgtgggctggacgccgagaaggaagcc
gagctgaagtccctgactgcccttgcctgcgaagccgtgggtacccagggctgggcccgt
gccgatgtgatgcaggatgccgaggggcgcttctggctgctggaggtcaacaccgtgccc
ggcatgaccgaccacagcctggtgccgatggccgcgcgcgccgtgggcctggattaccag
caactggtgctggccgtccttgccgacagcgtcgaggcgcggggttaa
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