Metapseudomonas otitidis: PtoMrB4_14960
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Entry
PtoMrB4_14960 CDS
T06890
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00061
Fatty acid biosynthesis
poj00071
Fatty acid degradation
poj01100
Metabolic pathways
poj01212
Fatty acid metabolism
poj02024
Quorum sensing
poj04146
Peroxisome
Module
poj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PtoMrB4_14960 (fadD1)
00071 Fatty acid degradation
PtoMrB4_14960 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PtoMrB4_14960 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PtoMrB4_14960 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
poj01004
]
PtoMrB4_14960 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poj04147
]
PtoMrB4_14960 (fadD1)
Enzymes [BR:
poj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PtoMrB4_14960 (fadD1)
Lipid biosynthesis proteins [BR:
poj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PtoMrB4_14960 (fadD1)
Exosome [BR:
poj04147
]
Exosomal proteins
Exosomal proteins of breast milk
PtoMrB4_14960 (fadD1)
Exosomal proteins of breast cancer cells
PtoMrB4_14960 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BCA27519
UniProt:
A0A679GIQ8
LinkDB
All DBs
Position
1599054..1600739
Genome browser
AA seq
561 aa
AA seq
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MTDNFWTDKYPAGVPAEINADAYPNIQAVLKESCQRFADKPAFSNLGKTLTYGELYALSG
AFAAYLQNHTDLQPGDRIAVQLPNVLQYPVVVFGALRAGLVVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAESVLPKTGIRHVVVTEVGDLLPPLKRLLVNSVIKYVKKMVPAFH
LPQAVKLNQALAKGQGKAVREASPAANDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCK
ALMGANLNEGCEVLITPLPLYHIYAFTFHCMAMMLTGNHNILISNPRDLPAMVKELGNWK
FTGFVGLNTLFVALCNNEDFRKLDFSALKLTLSGGMALQLAAAERWKEVTGCAICEGFGM
TETSPVVSVNPFQSIQIGTIGIPVPSTQCKVVDDEGNDLAIGAIGELCVKGPQVMKGYWQ
RQDATDEILSADGWLKTGDIGLIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGEAIKVFVVVKPGASLTKDEVMQHMRANVTGYKVPRSVEFRDSLPT
TNVGKILRRELRDQELKKLKG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataacttctggacggacaagtatccagcaggcgttcctgcggaaatcaatgcc
gacgcttaccccaacattcaggcggtattgaaagagtcctgccaacgctttgccgacaag
cccgcattcagcaacctgggcaagaccctcacctacggtgagctctacgcactctccggt
gccttcgccgcctacctgcagaaccacaccgacctgcagcccggcgaccgtatcgccgtg
caactgcccaacgtcctgcagtaccccgtcgtggtcttcggcgccctgcgcgccggcctg
gtggtggtgaacaccaacccgctgtacaccgcgcgggagatggagcaccagttcaacgac
tccggcgccaaggccctggtgtgcctggccaacatggcccacctggccgagagcgtgctg
cccaagaccggcatccgccatgtggtggtgactgaagtgggcgacctgctgccgccgctc
aagcgcctgctggtgaacagcgtcatcaagtacgtgaagaagatggtcccggccttccac
ctgccccaggccgtcaagctcaaccaggcactggccaagggccagggcaaggccgtgcgc
gaagcctcgccggccgccaacgacgttgccgtgctgcagtacaccggcggcaccaccggc
gtggccaagggcgcgatgctcacccatcgcaacctcatcgccaacatgctgcagtgcaag
gcgctgatgggcgccaacctcaatgaagggtgcgaggtgctcatcaccccgctgccgctc
tatcacatctacgccttcaccttccattgcatggcgatgatgctgaccggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgggcaactggaag
ttcaccggcttcgtcggcctcaacaccctgttcgttgccctgtgcaacaacgaggacttc
cgcaagctcgacttctccgccctcaagctcaccctgtccggcggcatggccctgcaactg
gctgcggccgagcgctggaaagaggtcaccggctgcgccatctgcgaaggcttcggcatg
accgagaccagccccgtggtgtcggtgaacccgttccagagcatccagatcggcaccatc
ggcatcccggtcccctcgacccagtgcaaggtggtggacgacgagggcaacgacctcgcc
atcggcgccatcggcgagctgtgcgtcaagggcccgcaggtgatgaagggctactggcag
cgccaggacgccaccgacgagatcctctcggcggacggctggctgaagaccggcgacatc
ggcctgatccaggaagacggctacatgcgcatcgtcgaccgcaagaaggacatgatcctg
gtctccggcttcaacgtgtacccgaacgagctggaagacgtgctcgccaccctgccgggc
gtgctgcaatgcgctgccatcggcatcccggacgagaagtccggcgaggcgatcaaggtc
ttcgtggtggtcaagccgggtgccagcctgaccaaggacgaggtgatgcagcacatgcgc
gccaacgtcaccggctacaaggtcccgcgctccgtcgagttccgcgacagcctgccgacc
accaacgtcggcaagatcctgcgccgtgaactgcgtgaccaggaactgaagaagctcaag
ggctga
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