Metapseudomonas otitidis: PtoMrB4_15190
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Entry
PtoMrB4_15190 CDS
T06890
Name
(GenBank) helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poj03009
]
PtoMrB4_15190
Enzymes [BR:
poj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PtoMrB4_15190
Ribosome biogenesis [BR:
poj03009
]
Prokaryotic type
rRNA helicases
PtoMrB4_15190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BCA27542
UniProt:
A0A679GET4
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All DBs
Position
1623585..1624916
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AA seq
443 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQQAAIPPALEGRDLRVTARTGSGKTAAFVLPLLN
RLIGEAKPRERIRSLILLPTRELAQQTLKEVERFSQFTFIKSGLVTGGEDFKVQAAMLRK
LPDVLVSTPGRLIEHLNSGTVSLKEVEVLVLDEADRMLDMGFAEDMQRITAECANRQQTL
LFSATTGGAALREVSAQVLKDPLHLRLNGIEQLNESTRQQVITADDVDHKEALARWLLAN
ETYQKAIVFTNTRAQADRFYGHLVAAGYKAFVLHGDKDQKDRKLAIDRVREGGTKVLVAT
DVAARGLDIEGMDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAVSLICHNDWNLMSSVER
YLKQSFERRVIKELKGTYNGPKKVKASGKAVGSKKKKTDKKSTGKASAKPAAKRKPSSPR
REQPQVVSSDGLAPLKRRKPAAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgttctcccaattcgccctgcacgaacgtctgctcaaggctgtcgccgaactgaaattc
gtcgaaccgacgcccgtgcagcaggcggcgattcccccggcgctggaagggcgcgacctg
cgcgtcaccgcgcgcaccggcagcggcaagacggcggccttcgtgctgcccctgctgaac
cgcctgatcggtgaagccaagccccgcgagcgcatccgttcgctgatcctgctgccgacc
cgggagctggcccagcagaccctgaaggaagtggagcgcttctcgcagttcaccttcatc
aagtccggcctggtgaccggcggcgaggacttcaaggtccaggccgccatgctgcgcaag
ctgccggacgtgctggtgagcacccccggccgcctgatcgagcacctcaactccggcacc
gtgagcctcaaggaggtggaggtgctggtgctggacgaggccgaccgcatgctggacatg
ggcttcgccgaggacatgcagcgcatcaccgccgaatgcgccaaccgccagcagaccctg
ctgttctccgccaccaccggcggcgcggccctgcgcgaggtgtccgcccaggtcctgaag
gacccgctgcacctgcgcctgaacggcatcgagcagctcaacgagtcgacccggcagcaa
gtcatcaccgccgacgacgtggaccacaaggaagccctggcgcgctggctgctggccaac
gagacctaccagaaggccatcgtcttcaccaacacccgtgcccaggccgaccgtttctac
ggccacctggtggcggccggctacaaggccttcgtgctgcacggcgacaaggaccagaag
gaccgcaagctggccatcgaccgcgtgcgcgagggcggcaccaaggtgctggtggccacc
gacgtggcggcccgtggcctggacatcgaaggcatggacctggtgatcaacttcgacatg
ccgcgctccggcgacgagtacgtgcaccgcgtcggccgcaccggccgtgccgggggcgag
ggcctggccgtctcgctgatctgccacaacgactggaacctgatgtccagcgtcgagcgc
tacctcaagcagagcttcgagcgccgtgtgatcaaggagctgaaaggcacctacaacggg
ccgaagaaggtcaaggcctcgggcaaggcggtcggtagcaagaagaaaaagaccgacaag
aagagcaccggcaaggcatccgccaagcccgccgccaagcgcaagccgtccagcccgcgc
cgcgagcagccgcaggtggtgagcagcgacggcctggcaccgctcaagcgtcgcaagccg
gcggctgagtga
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