Metapseudomonas otitidis: PtoMrB4_20000
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Entry
PtoMrB4_20000 CDS
T06890
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poj03032
]
PtoMrB4_20000
03036 Chromosome and associated proteins [BR:
poj03036
]
PtoMrB4_20000
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_20000
DNA replication proteins [BR:
poj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PtoMrB4_20000
Chromosome and associated proteins [BR:
poj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PtoMrB4_20000
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PtoMrB4_20000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BCA28023
UniProt:
A0A1I0SVP8
LinkDB
All DBs
Position
complement(2161033..2161314)
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIADATDATRATVRAVLEQLSEIVSDSLENGDEITLPGIGKLKVSERPAR
TGRNPQTGKSIEIAAKKVVKLVPAKALTDAING
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaccaaagaccaactcatcgccgacatcgccgacgccacagacgccacccga
gccaccgtgcgcgccgtgctggagcaactgagcgagatcgtcagcgactcgctggagaac
ggcgatgagatcaccctgccgggcatcggcaagctcaaggtcagcgaacgcccggcgcgc
accggccgcaacccgcagaccggcaagagcatcgagatcgccgcgaagaaggtggtcaaa
ctggtgccggccaaggccctgaccgacgccatcaacggctga
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