Metapseudomonas otitidis: PtoMrB4_27860
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Entry
PtoMrB4_27860 CDS
T06890
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
poj
Metapseudomonas otitidis
Pathway
poj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PtoMrB4_27860 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_27860 (ku)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PtoMrB4_27860 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BCA28809
UniProt:
A0A679GMP9
LinkDB
All DBs
Position
3054308..3055207
Genome browser
AA seq
299 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVDLVSASSSGGVDFDWLDDRSMEPVGYRRVNKVTGKEVPREH
IVKGVEHAPGEYVVLSEEEIQQAHPRATRTIDIFAFVDAGQIPLQNIDTPYYLSPDRRSG
KVYALLRESLVASGKVALAEVVLRTRQYLAAVMPQESALVLVTLRWPADVKGLGILDLGS
EVTEPTLAKGELAMAKRLIEDMTQDWQPDDYRDTFTEKVMDLVEQKAQEGHVERVERPDE
EAPQGADIIDLTELLRRSLGGKGAKPEKSEKAAPAKAPRKRAPAKAAKDDASRPRRRKA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgcgatctggaaaggggcgatcagcttcgggctggtgcacatcccggtggac
ctggtgtccgccagcagctccggcggggtggatttcgactggctggacgaccgctccatg
gagccggtgggctaccgccgggtgaacaaggtcaccggcaaggaggtgccccgcgagcac
atcgtcaagggggtggagcacgcccccggcgagtacgtggtgctgagcgaggaggagatc
cagcaggcgcacccgcgtgcgacgcggaccatcgacatcttcgccttcgtggatgccggg
cagatcccgctgcagaacatcgacacgccctattacctgagccccgaccggcgcagtggc
aaggtctatgcgctgctgcgcgagtccctggtggccagcggcaaggtggccctggcggag
gtggtgttgcgcacccgccagtacctggcggcggtgatgccccaggagtcggcgctggta
ttggtgacgctgcgctggccggcggatgtgaagggcctgggcatcctcgacctgggcagc
gaggtgaccgagccgaccctggccaagggcgagctggcgatggccaagcggctgatcgag
gacatgacccaggactggcagccggacgactaccgcgacaccttcaccgagaaggtgatg
gacctggtggaacagaaggcccaggagggccacgtggagcgggtcgaacggccggacgag
gaggcgccccagggcgcggacatcatcgacctcaccgagctgctgcggcgcagcctgggc
ggcaagggggcgaagccggaaaagagcgagaaggccgcgccggccaaggcaccgcgcaag
cgtgccccggccaaggcggcgaaggacgacgccagccggccgcgccgacgaaaggcctga
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