Metapseudomonas otitidis: PtoMrB4_28880
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Entry
PtoMrB4_28880 CDS
T06890
Symbol
ydcT
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
poj
Metapseudomonas otitidis
Pathway
poj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PtoMrB4_28880 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poj02000
]
PtoMrB4_28880 (ydcT)
Transporters [BR:
poj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PtoMrB4_28880 (ydcT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_16
nSTAND_NTPase5
AAA_29
NigD_N
Motif
Other DBs
NCBI-ProteinID:
BCA28911
UniProt:
A0A1I0UK11
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All DBs
Position
3158296..3159324
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AA seq
342 aa
AA seq
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MTTPAVQFTQVSRQFGEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAG
SIRIHGEEAAGLPPYLRDVNTVFQDYALFPHMSVLENVAYGLKVKGVAKSERLARAEEAL
GMVALGGYGGRKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKK
LQRQLGITFIFVTHDQSEALSMSDRVAVFNKGRIEQVDTPRNLYMKPATPFVAEFVGTSN
VLRDDLARQLTGNPQPFSIRPEHIRFAQGACASGEVELSGLLHDIQYQGAATRYEIRLDN
GQNLCVSQANDQWQAIDLAHQSGQRVTLRWAREAMVLLNEGA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcccgccgttcaattcacccaggtctcccgccagtttggcgaggtcaaggct
gtcgaccgggtttccatcgatatccaggacggggagttcttttccatgctcggcccatcc
ggctcgggcaagaccacctgcctgcgcctgatcgccggtttcgagcagcccagcgcgggt
tccatccgcatccacggcgaggaggccgccggcctgccgccctacctgcgggacgtcaac
accgtcttccaggactacgccctgttcccgcacatgagcgtgctggagaacgtcgcctac
ggcctcaaggtcaagggcgtggccaagtccgagcgcctggcccgtgccgaagaggccctg
ggcatggtggccctgggcggctacggcggccgcaaaccggtgcagctgtccggcggccag
cgccagcgcgtggccctggcccgtgccctggtcaaccgcccccgcgtgctgctgctggac
gaacccctcggcgccctcgacctcaagctgcgcgagcagatgcagagcgagttgaagaag
ctccagcgccagctgggcatcaccttcatcttcgtcacccacgaccagagcgaagcgctg
tccatgtccgaccgcgtggccgtgttcaacaagggccgcatcgagcaggtggacaccccg
cgcaacctctacatgaagccggccacccccttcgtcgccgagttcgtcggcacctccaac
gtcctgcgcgacgacctggcccgccagctcaccggcaacccgcaacccttctccatccgc
cccgagcacatccgcttcgcccagggtgcctgcgccagcggcgaggtggagctgagcggc
ctgctgcacgacatccagtaccagggcgccgccacccgctacgagatccgcctggacaac
ggccagaacctctgcgtcagccaggccaacgaccaatggcaagccatcgacctcgcccac
cagagcggccagcgcgtcaccctgcgctgggcccgcgaggcgatggtgctgctgaacgag
ggcgcctga
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integrated database retrieval system
