Metapseudomonas otitidis: PtoMrB4_31960
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Entry
PtoMrB4_31960 CDS
T06890
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poj03000
]
PtoMrB4_31960
Transcription factors [BR:
poj03000
]
Prokaryotic type
Helix-turn-helix
Other families
PtoMrB4_31960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
AAA_5
PAS_4
GAF_2
HTH_30
AAA_2
HTH_28
PAS_9
HTH_7
HTH_1
HTH_23
DUF134
HTH_29
AAA
Mga
HTH_22
HTH_50
HTH_11
HTH_20
AAA_7
HTH_17
AAA_22
MCM
CUE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCA29219
UniProt:
A0A679GNW8
LinkDB
All DBs
Position
complement(3532411..3534294)
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AA seq
627 aa
AA seq
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MATDPLHQSYQARLKLLNEGELPRGVLREEIDASWRRSLGHGLNCLEGEQPELRHHDLGL
LLEGNRLLIDAATPELEYLVSQQGKGGLIILGDAQANLLAIEGQTEFLKGSGLRDLRPGS
CWSESSRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPQGQVVGVLDLTRQ
GVMAQPEDNLATLMLAAGNIESRLFALTYGDHLVVAFHNRPQYLGSAWHGLLALSLEGEV
VAANERACELLRVGRDALVGRRGSDLIGERAAPFIARLLKGGISSVQTAQGEFFFRALQV
PRHSPLGHTAPAAAKAPSHTTSQALEALAGHDGRFARALRMARQALASDLPVLLLGETGT
GKEVVARALHQASPRAEKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMVGRLMQA
HGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAAEEQAIDVAVICATHRDLRRLVQDQ
HFREDLYYRINGVSLRLPALRERDDLAGMIAGVLARFGASDVSLDKDLAELFSGYDWPGN
IRQLEMVLRAALAMREPGETVLGLDHLTDSLLDDLTATTRQPGSIRENELELIRAALERH
QGNVSAAADALGISRATLYRKLKQLRG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgatccacttcaccagtcgtaccaggcacggctgaagctgctcaacgagggc
gaactgccccgcggtgtgctccgcgaggagatcgatgcctcatggcggcgcagcctcggc
cacgggctcaactgcctcgaaggcgagcagcccgaactccgtcatcacgacctcggcctg
ctgctggaaggcaaccgcctgctgatcgatgccgccacccccgagctggagtacctggtc
agccagcagggcaagggcgggttgatcatcctcggcgacgcccaggccaacctgctggcc
atcgaaggccagaccgaattcctcaagggctccggcctgcgtgacctgcgccccggcagt
tgctggagcgaatcgagccgtggcaccaatgccatcggcacggcggtggtggaaggccgg
ccgactctgatcaactgcggtgagcattatctcgaccggctcagcccgttctcctgcacc
tcggtgccgctgcgcgatccccaggggcaggtggtgggcgtgctggacctgacccggcaa
ggcgtcatggcccagcccgaggacaacctcgccaccctgatgctggccgccggcaatatc
gagagccgcctgttcgccctgacctacggcgatcacctggtggtggccttccacaaccgt
ccgcagtacctgggcagcgcctggcacgggttgctggccctgagcctggagggcgaggtg
gtcgccgccaacgagcgtgcctgcgaactgctgcgggtcggacgggatgccctggtgggc
cgccgtggcagcgacctgatcggcgagcgcgccgctccgttcattgcccgcctgctcaag
ggcggcatcagcagcgtgcagaccgcccagggcgagttcttcttccgcgcgctccaggtg
ccccgtcacagccccctcggccacacggccccggcggcggccaaggcgcccagccatacg
acatcccaggccctggaggccctggccggccacgacggccgcttcgcccgcgccttgcgc
atggcccgccaggccctggccagcgacctgcccgtgctgctgctgggggaaaccggcacc
ggcaaggaggtggtggcccgcgccctgcaccaggccagcccgcgtgccgagaaacccttc
gtggcggtgaactgcgcggccattcccgagggcctgatcgagtccgagctgttcggttac
cgcgaaggcgccttcaccggctcccgccgtggcggcatggtcggccgcttgatgcaggcc
cacggcggcacgctgttcctcgacgagatcggcgacatgcccctcgcgctccaggcccgc
ctgctgcgggtgctgcaggagcgccgggtggctcccctcggcgccgccgaggagcaggcc
atcgacgtggcggtgatctgcgccacccaccgcgacctgcgccggctggtgcaggaccag
cacttccgcgaagacctctactaccgcatcaacggcgtcagcctgcgcctgccggccctg
cgcgagcgggacgacctggccgggatgatcgccggcgtgctggcccgcttcggtgccagc
gacgtcagcctggacaaggacctcgccgagctgttcagcggctacgactggccgggcaac
atccgccagctggaaatggtcctgcgcgcggccctggccatgcgcgaaccgggggagacc
gtgctggggctggaccacctcaccgacagcctgctggacgacctcaccgccaccacccgc
cagcccggcagcatccgcgagaacgaactggagctgatccgcgccgccctggagcggcac
cagggcaatgtctccgccgccgccgatgccctgggcatcagccgcgccaccctgtaccgc
aagctcaagcagctcaggggatga
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