Metapseudomonas otitidis: PtoMrB4_32930
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Entry
PtoMrB4_32930 CDS
T06890
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_32930
Enzymes [BR:
poj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PtoMrB4_32930
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PtoMrB4_32930
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
TPR_8
Motif
Other DBs
NCBI-ProteinID:
BCA29316
UniProt:
A0A679GEA6
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All DBs
Position
3619963..3621501
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AA seq
512 aa
AA seq
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MPVRRLALVLGDQLSFDLAALRALDPAQDAVLMAEVQEETRYVPHHPQKIVLILSAMRHF
AEALRQRGFTVHYVQLDDPANSGSLPGELSRWATQLQAREVHLTECGEWRLEQALRAADL
PQVWHEDDRFLCSRATFAGWAEGRKQLRMELFYRLMRKRTGLLMEPDGSTPLGGAWNFDA
ENRKALPKGVKAPLPARFPPDATTTAVIDLVRQRFSDHYGQVEGFDYPVTHAEAERLWQC
FLDQGLTAFGDYQDAMAEGEPFLFHARISAALNIGLLDLRRLCDDVESAYRRGDVPLNAA
EGFIRQLIGWREYVRGIYWLQMPDYAQRNAFGNQRPLPDFYWTADTRMNCMRQAIGQTLE
HAYAHHIQRLMVTGNFALLAGIAPPAICDWYLAVYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYIKRMSDYCGSCHYKVSESTSERACPFNALYWHFLMRHRDRLRGNHRLGMI
YRSLERMDEAKQDALWARGEALLARLDAGEAL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtacgccgcctggcgctggtcctcggcgaccagctgagcttcgacctcgccgcc
ctgcgcgccctcgaccccgcgcaggacgcggtgctgatggccgaagtgcaggaagagacc
cgctacgtgccgcaccacccgcagaagatcgtgctgatcctcagcgccatgcggcacttc
gccgaggccctgcgccaacgcggcttcaccgtgcactacgtgcagctcgacgaccccgcc
aacagcggcagcctgcccggcgagctcagccgctgggccacgcagctgcaggcgcgggag
gtgcacctcaccgaatgcggcgagtggcgcctggagcaggccctgcgcgccgccgacctg
ccccaggtgtggcacgaggacgaccgcttcctctgcagccgcgccaccttcgccggctgg
gccgaaggccgcaagcaactgcgcatggagctgttctaccggctgatgcgcaagcgcacc
gggctgctcatggagcccgacggcagcaccccgctgggcggtgcctggaacttcgacgcc
gagaaccgcaaggccctgcccaagggcgtcaaggccccgctgccggcacgcttcccgccg
gacgccaccaccacagcggtgatcgacctggtgcgccagcgcttcagcgaccactacggc
caggtggagggcttcgactaccccgtcacccacgccgaggccgagcgcctctggcagtgc
ttcctcgaccagggcctgaccgccttcggcgactaccaggacgccatggccgaaggcgag
cccttcctcttccacgcgcgcatcagcgccgcgctgaacatcggcctgctggacctgcgc
cgcctctgcgacgacgtggaaagcgcctaccggcgcggcgacgttccgctgaacgccgcc
gaaggtttcatccgccagctcatcggctggcgcgagtacgtgcgcggcatctactggctg
cagatgcccgactacgcccagcgcaacgccttcggcaaccagcgcccgctgcccgatttc
tactggaccgccgacacccgcatgaactgcatgcgccaggccatcggccagaccctggaa
catgcctacgcccaccacatccagcggctgatggtcaccggcaacttcgccctgctggcc
gggatcgccccgccggccatctgcgactggtacctggcggtctacatggacgccttcgac
tgggtcgaactgcccaacaccctgggcatggtcatgcacgccgacggcggctacctgggc
tccaagccgtattgcgccagcggccagtacatcaagcgcatgtccgactactgcggcagc
tgccactacaaggtcagcgagagcaccagcgagcgggcctgtccgttcaacgccctgtac
tggcacttcctcatgcgccaccgcgaccgcctgcgcggcaaccaccgcctgggcatgatc
taccgcagcctggagcgcatggacgaggccaaacaggacgccctctgggcccggggcgaa
gccctgctggcccggctcgacgccggggaggcgctgtga
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