KEGG   Metapseudomonas otitidis: PtoMrB4_34220
Entry
PtoMrB4_34220     CDS       T06890                                 
Symbol
femI
Name
(GenBank) ECF sigma factor FemI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
poj  Metapseudomonas otitidis
Pathway
poj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:poj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PtoMrB4_34220 (femI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:poj03021]
    PtoMrB4_34220 (femI)
Transcription machinery [BR:poj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PtoMrB4_34220 (femI)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_40 HTH_24 GerE HTH_11 HTH_IclR DUF2774 HTH_AsnC-type DUF7646 HTH_Tnp_ISL3 HTH_38
Other DBs
NCBI-ProteinID: BCA29445
LinkDB
Position
3754518..3755027
AA seq 169 aa
MDQLADHQRRALHELYVEHHGWLKQWLRSRLGCREQAADLAQDTFVRVISQRKLTDLRQP
RAYLTTVARSLVIDQYRRRTLEHAYLETLAALPEPVDISPETRSIIIETLMEIDTLLDGI
SGRAREIFLMAQLDGLTFTEIGKRLGLSVNTVRKHFVRAMTHCLLLLED
NT seq 510 nt   +upstreamnt  +downstreamnt
atggaccagctcgccgaccaccagcgccgcgccctgcacgaactctatgtcgaacatcac
ggctggctgaagcaatggctccgcagtcggctcggctgccgtgagcaggccgccgatctt
gcgcaggacaccttcgtgcgagtcatcagccagcgaaaactgaccgacctgcgccaaccc
cgcgcctacctcaccacggtcgcgcgcagcctggtgatcgaccagtaccgccgtcgaacg
ctggagcacgcgtacctggagacgctcgccgccctgccggaacccgtggacatctcgccg
gaaacgcgcagcatcatcatcgagacgctgatggagatcgacaccctgctcgacggcatc
agcggccgggctcgcgaaatcttcctcatggcccagctcgatgggctgaccttcacggag
atcggcaagcggctgggcctttccgtcaatacggtacgcaagcacttcgtgcgcgccatg
acccactgccttctgctactggaggactga

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