Metapseudomonas otitidis: PtoMrB4_34410
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Entry
PtoMrB4_34410 CDS
T06890
Symbol
oprD_1
Name
(GenBank) porin D
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
poj
Metapseudomonas otitidis
Pathway
poj01501
beta-Lactam resistance
poj02020
Two-component system
Module
poj_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PtoMrB4_34410 (oprD_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PtoMrB4_34410 (oprD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poj02000
]
PtoMrB4_34410 (oprD_1)
01504 Antimicrobial resistance genes [BR:
poj01504
]
PtoMrB4_34410 (oprD_1)
Transporters [BR:
poj02000
]
Other transporters
Pores ion channels [TC:
1
]
PtoMrB4_34410 (oprD_1)
Antimicrobial resistance genes [BR:
poj01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PtoMrB4_34410 (oprD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
BCA29464
UniProt:
A0A679GTV4
LinkDB
All DBs
Position
complement(3776410..3777720)
Genome browser
AA seq
436 aa
AA seq
DB search
MNTPRLARAALLLSGITATPLMAADSPEGFLEGSRLQLNQRNFYFHRNLLNNPGGQNYRE
EWAHGFTLDYQSGYTQGTVGFGLDAYANLGLKLDSNRTRTGTDLLPVDSRGRPEDSQAEI
GGALKLRVSRTELKYGSQAPMNPVFGTGNARLFAPMPIGLSLGSREVENLLLEAGHFTAG
NDGNSTNRDGALKALFAQVETRRADYLGGQWAPSDATHLSAYASRYEDIWRQYYLGAGQR
LDLADQQSLTLDASLYRTLDQGRSLAGRIDTTAWSASARYRVGAHALTLAHQRVNGDQPF
DYLGFDRQPGTSIYLANSVQVLDFNAPNERSWQVRYDLDFALFGVPGLSFMSRYIRGDHI
DDSHRSSPSAYQRYGEAGKRWERDIELGYVVQGGSAKDLSIRLRQASIRSTAQVGRADTA
DNNELRVIIDYPLQLL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccccgcgattggcccgcgcagccttgctcctgagcggcatcaccgccaccccg
ctgatggccgccgacagccccgaaggcttcctcgaaggcagccgcctgcagctcaaccag
cgcaacttctacttccaccgcaacctgctcaacaacccgggcgggcagaactaccgcgag
gagtgggcccacggcttcaccctcgactaccagtccggctacacccagggcaccgtcggc
ttcggcctggacgcctacgccaacctcggcctcaagctcgacagcaaccgcacccgcacc
ggcaccgacctgctgccagtcgactcccggggccgccccgaagacagccaggccgagatc
ggcggcgccctcaagctgcgtgtctcccgcaccgagctgaagtacggcagccaggccccc
atgaaccccgtgttcggcaccggcaacgcgcggctgttcgcccccatgcccatcggcctc
tccctcggcagccgcgaggtggagaacctcctgctggaggccgggcatttcaccgccggc
aacgacggcaactccaccaaccgcgacggcgccctcaaggccctgttcgcccaagtggaa
acccgccgcgccgactacctcggcggccagtgggcccccagcgacgcgacccacttgtcc
gcctacgcctcgcgctatgaggacatctggcggcagtactacctcggcgccggccagcgc
ctcgacctggccgaccagcagtccctcacgctcgacgccagcctctaccgcaccctcgac
cagggccgcagcctggccggccgcatcgacaccaccgcctggtccgcctccgcccgctac
cgcgtcggcgcccacgccctgaccctggcgcaccagcgggtgaacggcgaccagcccttc
gactacctcggcttcgaccgccagcccggcacctccatctacctcgccaactccgtgcag
gtcctcgacttcaacgcccccaacgagcgctcctggcaagtgcgctacgacctcgacttc
gccctcttcggcgtgcccgggctcagcttcatgagccgctacatccggggcgaccacatc
gacgacagccaccgcagcagccccagcgcctaccagcgctacggcgaggccggcaagcgc
tgggagcgggacatcgaactcggctacgtcgtccagggcggcagcgccaaggacctctcc
atccgcctgcgccaggccagcatccgctccaccgcccaggtcggccgggccgacaccgcc
gacaacaacgaactgcgggtgatcatcgactacccgctgcaactgctctga
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