Metapseudomonas otitidis: PtoMrB4_36140
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Entry
PtoMrB4_36140 CDS
T06890
Symbol
fliA_2
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
poj
Metapseudomonas otitidis
Pathway
poj02020
Two-component system
poj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PtoMrB4_36140 (fliA_2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PtoMrB4_36140 (fliA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poj03021
]
PtoMrB4_36140 (fliA_2)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
poj02035
]
PtoMrB4_36140 (fliA_2)
Transcription machinery [BR:
poj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PtoMrB4_36140 (fliA_2)
Bacterial motility proteins [BR:
poj02035
]
Flagellar system
Flagellar assembly proteins
Stator
PtoMrB4_36140 (fliA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
GerE
HTH_AsnC-type
MarR_2
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
BCA29637
UniProt:
A0A1I0T4Q9
LinkDB
All DBs
Position
complement(3949106..3949825)
Genome browser
AA seq
239 aa
AA seq
DB search
MYNKAQAGDSQHQLIERYAPLVKRIAYHLLARLPANVQVEDLMQAGMIGLLEASKKYDSS
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRKVEARTGRDAKDQEVAA
ELGLSLEDYYGILSDTLGSRLFSFDDLLEGGEHGTAHEDTGVTHLEPSNDLEDERFQAAL
ADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLGEWRA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaaggctcaggccggggattcccagcaccagctgatcgagcgctacgcgccc
ctggtcaagcggatcgcctaccacctgctggcacgcttgccggcgaacgtgcaggttgaa
gacctcatgcaggcggggatgatcggcctgctggaagcatcgaagaagtacgactccagc
aagggtgcgagtttcgagacctacgccggcatccgcatccgcggggcgatgctcgacgag
gtccgcaagggcgactgggcaccgcgctcggtccaccgcaatacccggatggtcagcgac
gccatccgcaaagtcgaggcaagaactggacgtgacgctaaagatcaggaggttgcggcc
gaacttggattgagtctcgaagattactacggcatcctgagcgacactttgggcagccgg
ctgttcagcttcgacgaccttctggaaggcggggagcatggcacggcgcacgaagatacc
ggagtcacccatctcgaaccttcgaatgacctggaagacgagcgcttccaggcggcgctg
gccgatgccatcgccaatctgccggaacgagagcgcctggtgctggcgctgtattacgac
gaagagctgaatttgaaggaaatcggtgaagtgctgggagtcagtgaatcccgagtcagc
cagttgcacagccagtgcgccgcacgtctgcgggcccggctgggtgagtggcgtgcctga
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integrated database retrieval system
