Metapseudomonas otitidis: PtoMrB4_36840
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Entry
PtoMrB4_36840 CDS
T06890
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03030
DNA replication
poj03430
Mismatch repair
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PtoMrB4_36840 (dnaQ)
03430 Mismatch repair
PtoMrB4_36840 (dnaQ)
03440 Homologous recombination
PtoMrB4_36840 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poj03032
]
PtoMrB4_36840 (dnaQ)
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_36840 (dnaQ)
Enzymes [BR:
poj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PtoMrB4_36840 (dnaQ)
DNA replication proteins [BR:
poj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PtoMrB4_36840 (dnaQ)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PtoMrB4_36840 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BCA29707
UniProt:
A0A1I0T6J0
LinkDB
All DBs
Position
complement(4021803..4022540)
Genome browser
AA seq
245 aa
AA seq
DB search
MRYVVLDTETTGMPVTDGHRIIEIGCVELEGRRLTGRHFHQYLQPDREVDEGAIAVHGIT
NEFLVGKPRFKDVADEFFEFIKGAELIIHNAAFDIGFINNEFALLGQSDRSDIAEHCGVI
DTLMMARERHPGQRNNLDALCKRYDVDNSGRDLHGALLDAEILADVYLAMTGGQTNLSLA
GEGGDEGGRPQASPIRRIQGRVPGRVLRASEAELAAHLERLAVIEKASGGPALWAKLEAP
ATPEA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgtagtactggataccgaaaccaccggcatgccggtgaccgatggccaccgc
atcatcgagatcggttgcgtcgagcttgaagggcgccgcctcaccggtcgccacttccac
caatacctgcagcccgaccgcgaagtggacgaaggcgccatcgccgtccacggcatcacc
aacgagttcctggtgggcaagccgcgcttcaaggacgtcgccgacgaattcttcgaattc
atcaagggcgccgagctgatcatccacaacgcggcgttcgacatcggcttcatcaacaac
gagttcgccctgctggggcagagcgaccgttccgacatcgccgagcattgcggcgtgatc
gacaccctgatgatggcgcgcgagcgccatccgggtcagcgcaacaacctcgacgccctg
tgcaagcgctacgacgtcgacaactccggccgtgacctccacggcgcactgctcgacgcc
gagatcctcgccgacgtctacctggcgatgaccggcggccagaccaacctgtccctggcg
ggcgagggcggtgacgagggtggccggccccaggcctctcccatccgccgcatccagggc
cgtgtgcccggccgcgtgctgcgggccagcgaagcggaactggcggcccacctggagcgg
ctggcagtgatcgagaaggcctccggcggcccggccctgtgggccaagctggaagcaccg
gccacgcccgaggcgtga
DBGET
integrated database retrieval system
