Metapseudomonas otitidis: PtoMrB4_38400
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Entry
PtoMrB4_38400 CDS
T06890
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
poj
Metapseudomonas otitidis
Pathway
poj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PtoMrB4_38400 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_38400 (uvrB)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PtoMrB4_38400 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PtoMrB4_38400 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Myc-LZ
Motif
Other DBs
NCBI-ProteinID:
BCA29863
UniProt:
A0A679GH51
LinkDB
All DBs
Position
complement(4191683..4193698)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFQPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNSVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHLDRGDRIDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEKIKEELKERLEQLRGANKLLEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRDPGQAPPTLYDYLPPNALLVIDESHVTVPQIGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWELMAPQTIFVSATPGPYEGEHAGRVVEQVVRPTGLVDPE
IEVRPAATQVDDLLSEIRKRVALDQRVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRTGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGRAILYADNVTGSMQRAIDETERRRAKQIAFNEAHGIVPRGVQKDIKDILEGATV
PGARSNKRKAQAKAAEESARYEAELRSPSEINKRIRQMEEKMLQLARDLEFEAAAQLRDE
IQKLRDLLLKV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttcagctcgtcacgcgtttccagcccgccggcgaccagcccgaggccatc
cgtcagatggtggagggcctggaagcgggcctttcgcaccagaccctgctgggcgtgacc
ggctccggcaagaccttcagcatcgccaacgtgatcgctcaggtgcagcggcccactctg
gttctggcgcccaacaagaccttggcagcccagctttacggtgagttcaaggcctttttt
ccgaacaattccgtcgagtacttcgtctcgtactacgactattaccagcctgaggcctac
gtcccgtcctcggacacctacatcgagaaggatgcctcgatcaacgaccacatcgagcag
atgcgcctctcggcgaccaaggcgctgctggaacgaccggacgcgatcatcgtggccacc
gtgtcctcgatctatggcctcggtgaccccgcgtcctacctgaagatggttctgcacctg
gaccgtggggaccgcatcgaccaacgcgccttgcttcggcgcctggcggacctgcagtac
acccgcaacgacatggatttcgcccgcgccaccttccgggtgcgtggcgatgtgatcgac
atcttccccgccgaatccgacctggaggccatccgcgtcgagctgttcgacgacgaggtc
gagagcctttccgcgttcgacccgctcaccggcgaggtgatccgcaagctgccccgcttc
acgttctaccccaagagccactacgtcacgccgcgcgagacgctgctcgaggcggtagag
aagatcaaggaggagctcaaggagcggctggagcagttgcgtggcgccaacaagctgctg
gaggcccagcgactggagcagcgcacccgcttcgacctggagatgattctcgagctgggc
tactgcaacggcatcgagaactactcccgctacctgtccggacgtgatcccgggcaggca
ccgcccaccctgtatgactacctcccgccgaatgccctgctggtgatcgacgaatcccac
gtcaccgtcccgcagatcggcgccatgtacaaaggcgaccgttcccgcaaggaaaccctg
gtggagtatggcttccgcctgccgtccgccctggacaaccgcccgatgcgcttcgatgaa
tgggaactgatggcgccgcagaccatctttgtctcggccacgccggggccttacgagggt
gagcatgccggtcgcgtggtcgagcaggtggtgcgccccaccggcctggtggaccctgaa
atcgaagtgcggccggccgcgacccaggtggacgatctgctctcggagatccgcaagcgt
gtcgcgctggaccagcgcgtcctggtcacaaccctgaccaagcgaatggcggaggacctc
accgactacctgggggaccacgacgttcgcgtgcgctacctgcactccgacatcgacacc
gtcgagcgggtcgagatcatccgcgacctgcgcaccggcgcctttgatgtcctggtgggg
atcaacctgttgcgcgaaggcctggacatgcccgaggtgtcgctggtggccatcctggac
gcggacaaggagggcttcctgcgttcggagcgctcattgatccagaccatcggccgcgcc
gcgcggaacctgcacggccgggcgatcctctatgccgacaacgtcacgggatcgatgcag
cgggcaatcgacgagaccgagcgtcgccgtgccaagcagatcgccttcaacgaggctcac
ggcatcgtgcccaggggcgtccagaaggacatcaaggacatcctcgaaggcgcgaccgta
ccaggcgcgcgcagcaacaagcgcaaggcccaggccaaggcggccgaagagagtgcccgc
tacgaggccgaactgcgctcgcccagcgagatcaacaagcgcatccggcagatggaagag
aaaatgctccaactcgcccgcgatctggagttcgaagccgctgcgcaactgcgggacgaa
atccagaagctgcgcgacctgctgctgaaggtctga
DBGET
integrated database retrieval system
