Metapseudomonas otitidis: PtoMrB4_39250
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Entry
PtoMrB4_39250 CDS
T06890
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
poj
Metapseudomonas otitidis
Pathway
poj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PtoMrB4_39250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poj02000
]
PtoMrB4_39250
Transporters [BR:
poj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PtoMrB4_39250
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_16
AAA_22
nSTAND1
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_25
AAA
NACHT
AAA_5
NB-ARC
AAA_23
AAA_30
ATPase_2
nSTAND3
nSTAND_NTPase5
ORC-CDC6-like
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BCA29948
UniProt:
A0A679GNK0
LinkDB
All DBs
Position
4279072..4280058
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AA seq
328 aa
AA seq
DB search
MSFLSIRGLHKRYGQTTIFTDIDCEIGKGEFVTLLGPSGCGKSTLLRCIAGLTEVDGGQI
LLDGQDLVPLSPQKRGIGMVFQSYALFPNMTAAQNVAFGLRMQKVGRDDSARRVQEALAM
VELDQHAERYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRSIQ
QELGLTTIFVTHDQEEALTLSDRIFLMNAGRIVQSGDAETLYTAPVDAFAAGFIGNYNLL
EAEAASRLLQRPVSARVAIRPEAIALGEGGIEAEVRSHSLLGNVIRYRVQAQGVELLVDV
LNRSADDLHPVGRRIGLRIDADAVREVA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctctcgatccgcggcctgcacaaacgctacggccagaccaccatcttcacc
gacatcgattgcgagatcggcaagggcgagttcgtcaccctcctcggcccctcgggctgc
ggcaagtcgaccctgctgcgctgcatcgccggcctcaccgaggtggacggcgggcagatc
ctgctggacggccaggacctggtgccgctttcaccgcagaagcgcggcatcggcatggtg
ttccagagctacgccctgttccccaacatgactgccgcgcagaacgtcgccttcggcctg
cgcatgcagaaggtcggcagggacgacagcgcccgccgcgtgcaggaagccctggccatg
gtggagctggaccagcacgccgagcgctacccccaccagctttccggcggccagtgccag
cgcgtggccctggcccgctccctggtgacccgcccgcgcctgctgctgctggacgagccg
ctctcggccctcgacgcacgcatccgcaagcacctgcgcgagcagatccgcagcatccag
caggagctggggctgaccaccatcttcgtcacccacgaccaggaggaggcgctgaccctg
tccgaccgcatcttcctgatgaacgccgggcgcatcgtccagagcggcgatgccgaaacc
ctctacaccgcgccggtggacgccttcgccgccggcttcatcggcaactacaacctgctg
gaggccgaagccgccagccgcctgctgcaacggccggtcagcgcccgcgtggcgatccgc
ccggaggccatcgccttgggcgaaggcggcatcgaggccgaagtgcgcagccacagcctg
ctgggcaacgtcatccgctaccgggtccaggcccagggcgtggagctgctggtggacgtg
ctcaaccgctccgccgacgacctgcacccggtgggccggcgcatcggcctgcgcatcgac
gcggacgctgtccgggaggtggcgtga
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