Metapseudomonas otitidis: PtoMrB4_40550
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Entry
PtoMrB4_40550 CDS
T06890
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poj03009
]
PtoMrB4_40550 (rluC)
Enzymes [BR:
poj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PtoMrB4_40550 (rluC)
Ribosome biogenesis [BR:
poj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PtoMrB4_40550 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
BCA30078
UniProt:
A0A679GP34
LinkDB
All DBs
Position
complement(4415438..4416403)
Genome browser
AA seq
321 aa
AA seq
DB search
MIAAMTTPSSPTSGVQMLEVAPEYAGQRIDNFLRTQLKGVPKTLIYRILRKGEVRVNKGR
IKPEYKLQAGDVVRVPPLRLAERDEQVPVAQGLLERLEAAIVYEDKGLIVLNKPAGIAVH
GGSGLSYGVIEAFRQLRPDARELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDK
RYLALVRGSWPTSKKKVSAPLLKNTLRSGERMVEVDDEGKDALTEFRVLRRFGEFATLIE
ASPITGRTHQIRVHTRHAGHAIAGDPKYGDEDFSREIRDLGGKRLFLHAYALSLVLPDGT
PLSLEAPVDEMWSQTLERLGA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgccatgacgactccctcctctccaacttccggcgtgcaaatgctcgaagtt
gcgccggaatatgccggtcagcgtattgataatttcctccggacccagctgaaaggcgtc
cccaagaccttgatctaccgcatcttgcgcaagggcgaagtgcgggtgaacaaggggcgc
atcaagcctgagtacaagcttcaggctggcgatgtagttcgggtgccgccgctgcgtctc
gcggagcgggatgagcaggtaccggttgcccaggggctgctggagcgtctcgaagctgcc
atcgtttatgaagacaaggggctgattgtcctcaacaagccggccggcattgccgtgcat
ggcggcagcggcctcagttatggggtgatcgaggcgtttcgccagctgcggcccgatgca
cgcgagctagagctggtccatcgcctggaccgggatacctcgggcctgctgatgatcgcc
aagaagcgcagcatgttgcgtcacctccacgaagcactgcgcggtgatggcgtggataag
cgctacctcgccctggttcgggggagttggccgacgtcgaagaaaaaagtcagcgcaccg
cttctgaagaacaccctgcgctccggtgagcggatggtggaggtggatgacgagggtaag
gatgctctgaccgagttccgcgtgctgcggcgttttggtgagttcgccactttgatcgag
gcgagcccgattaccggtcgtacccatcagatccgggtccatacccggcatgccggccat
gccattgcgggtgatcccaagtacggcgatgaagatttttctcgggaaatccgcgatttg
ggcggcaaacgcctgttcctgcatgcctatgcgctctccctggttttgccggatggcacg
cccctgagtcttgaggcgccagtggatgaaatgtggtcgcagaccctggagcggttgggt
gcctga
DBGET
integrated database retrieval system
