Metapseudomonas otitidis: PtoMrB4_42560
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Entry
PtoMrB4_42560 CDS
T06890
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
poj
Metapseudomonas otitidis
Pathway
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PtoMrB4_42560 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_42560 (ruvA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PtoMrB4_42560 (ruvA)
RecFOR pathway proteins
PtoMrB4_42560 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
Transposase_20
HHH_8
5_3_exonuc
UBA_7
Motif
Other DBs
NCBI-ProteinID:
BCA30279
UniProt:
A0A679GS41
LinkDB
All DBs
Position
complement(4623742..4624347)
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AA seq
201 aa
AA seq
DB search
MIGRLRGTLAEKQPPHLILDVNGVGYELEVPMTTLYRLPSVGEPVTLHTHLVVREDAHLL
YGFYERRDRELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSTLVKIPGVGKKT
AERLLVELKDRFKAWENMPSIAPLIVEPVAGSGVSSAESDALSALIALGFKPQEASRAVA
AIKEEGLSSEEMIRRALKGMV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggacgtttgcgtggcaccttggcggagaaacagccgccgcacctgatcctcgac
gtcaatggcgtcggctacgaactggaagtgcccatgaccaccctctaccgcctgcccagt
gtcggcgagcccgtcaccctgcacacccacctggtggtgcgggaggatgcgcatctgctc
tacggcttctacgagcgccgtgaccgggagctgttccgcgagctgatccgcctcaacggc
gtcggccccaagctggccctggcgctcatgtccgggttggaggtagatgaactggttcgc
tgcgtgcaggcccaggacacgtccacgctggtgaagatccctggcgtcggcaagaagacc
gccgagcgcctgctggtggaactcaaggaccgtttcaaggcctgggagaacatgccctcc
atcgcccccctcattgtcgagcctgtggccggttccggtgtttccagcgccgaaagcgac
gccctcagcgccctcatcgccctcggcttcaagccgcaggaagccagtcgcgccgtcgct
gcgatcaaggaagaagggttgtccagcgaggaaatgatccgccgcgccctgaaaggaatg
gtgtaa
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