Metapseudomonas otitidis: PtoMrB4_43760
Help
Entry
PtoMrB4_43760 CDS
T06890
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj00300
Lysine biosynthesis
poj01100
Metabolic pathways
poj01120
Microbial metabolism in diverse environments
poj01230
Biosynthesis of amino acids
Module
poj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PtoMrB4_43760 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
poj01002
]
PtoMrB4_43760 (dapE)
Enzymes [BR:
poj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PtoMrB4_43760 (dapE)
Peptidases and inhibitors [BR:
poj01002
]
Metallo peptidases
Family M20
PtoMrB4_43760 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BDM
Motif
Other DBs
NCBI-ProteinID:
BCA30399
UniProt:
A0A679GSG2
LinkDB
All DBs
Position
4747620..4748759
Genome browser
AA seq
379 aa
AA seq
DB search
MTALSPTLELACDLIRRPSVTPVDEGCQDLMMRRLEAAGFRIERMRIEEVENFWAIRGGE
GPVLCFAGHTDVVPTGPVQAWQHQPFEALVDEHGMLCGRGAADMKGSLAAMVVAVERFVA
EHPDHKGAIAFLITSDEEGPAHHGTKAVVERLAARGERLDWCIVGEPSSTTLVGDVVKNG
RRGSLGATLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQVSNL
NAGTGATNVIPGELKAVFNFRFSTESTVEGLQQRVNAILDKHGLDYHVEWALSGLPFLTE
PGELLDAVAASIKAVTGRETTPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVNERVLA
SDLDLLTDIYQQTLVRLLA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccctctcccccaccctggaactcgcctgcgacctgatccgccgcccgtcggtc
accccggtcgacgaaggctgccaggacctgatgatgcgccgcctggaagccgccggcttc
cgcatcgaacgcatgcgcatcgaagaggtggagaacttctgggcgatccgtggcggcgag
ggcccggtgctgtgcttcgccggccacaccgacgtggtgcccaccggtccggtgcaggcc
tggcaacaccagccgttcgaggccctggtggacgagcacggcatgctctgcggccgtggc
gccgccgacatgaagggcagcctggccgccatggtggtggcggtggagcgcttcgttgcc
gagcacccggaccacaagggcgccatcgccttcctcatcaccagcgacgaggaaggcccg
gcgcatcatggcaccaaggccgtggtggaacgcctggccgcccgtggcgagcgcctggac
tggtgcatcgtcggcgagccctccagcaccaccctggtgggcgacgtggtgaagaacggc
cgtcgtggctctctcggcgccaccctcaccgtgcgcggcgtgcagggccacgtggcctac
ccgcacctggcgaagaacccgatccacctggccgccccggcgctggccgaactggcggcg
gagcactgggacgacggcaacgccttcttcccgcccaccagcttccaggtctccaacctc
aatgccggcaccggcgcgaccaacgtcattcccggtgaactgaaggcggtgttcaacttc
cgcttctccaccgaatccaccgtcgaaggcctgcagcagcgggtcaacgccatcctcgac
aagcacggcctggactaccacgtggagtgggccctgtccggcctgccgttcctcaccgaa
cctggcgagctgctggacgcggtcgccgccagcatcaaggccgtgaccggccgcgagacc
acgccctccaccagcggcggcacctccgatggccgcttcatcgccaccatgggtacccag
gtggtggaactcggcccggtcaacgccaccatccaccaggtcaacgagcgcgtcctggcc
agcgacctggacctgctgaccgacatctaccaacagaccctcgtccgcctgctggcctga
DBGET
integrated database retrieval system
