Pseudomonas otitidis: PtoMrB4_44980
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Entry
PtoMrB4_44980 CDS
T06890
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
poj
Pseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
poj03036
]
PtoMrB4_44980 (xerD)
Chromosome and associated proteins [BR:
poj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PtoMrB4_44980 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BCA30521
UniProt:
A0A679GH10
LinkDB
All DBs
Position
complement(4870777..4871673)
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AA seq
298 aa
AA seq
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MPALDHPLIDRFLDALWLEKGLSPHTRSAYRSDLAHFNGWLHERGCNLAEAGRDVLLDHL
AWRLEQGYKARSTARFLSGARGFYRFLLAEGEIAEDPTLQVEMPLLGRPLPKSLSEADVE
ALLEVPDLEDPIGLRDRAMLEVLYACGLRVSELVGLTLEQVNLRQGVVKVFGKGSKERLV
PLGEEAIAWIERYVREARPFLLDGKPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGILKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHADLSTTQIYTHIAQARLKDLHARHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcactcgaccaccccctgatcgaccgctttctcgacgccctctggctggagaaa
ggcctttcgccccacacccgctccgcctaccgcagcgacctggcgcatttcaacggctgg
ctgcacgagcgcggctgcaacctggcggaggccgggcgcgacgtattgctggaccacctc
gcctggcgcctggagcagggttacaaggcccgctccacggcgcgcttcctgtccggcgcg
cgaggcttctaccgcttcctgctggccgagggcgagatcgccgaggacccgaccctgcag
gtggagatgccgctgctgggccggccgctgcccaagtcgctgtccgaagccgatgtggag
gccctgctggaggtgccggacctggaggaccccatcggcctgcgtgaccgcgccatgctt
gaggtgctctatgcgtgcggcctgcgggtcagcgaactggtggggctgaccctggagcag
gtgaacctgcgccagggcgtggtcaaggtcttcggcaagggcagcaaggagcgcctggtg
ccgctgggcgaggaagccatcgcctggatcgagcgctacgtccgcgaagcgcggcccttc
ctgctggatggcaagcccagcgacgtactcttccccagcctgcgcggcgagcagatgacc
cggcagaccttctggcaccgcatcaagcaccaggcgaaggtggccggcatcctcaagccc
ctgtccccccacaccctgcggcacgccttcgccacccacctgctcaaccacggtgccgac
ctgcgggtggtgcagatgctgctcggccacgccgacctgtccaccacgcagatctacacc
cacatcgcccaggcccgcctcaaggacctccacgcccgccaccacccgagggggtga
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