Metapseudomonas otitidis: PtoMrB4_45310
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Entry
PtoMrB4_45310 CDS
T06890
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PtoMrB4_45310 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_45310 (xseA)
Enzymes [BR:
poj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PtoMrB4_45310 (xseA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PtoMrB4_45310 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCA30554
UniProt:
A0A679GX91
LinkDB
All DBs
Position
4909134..4910513
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AA seq
459 aa
AA seq
DB search
MYKDPFQRLGLDREVLTVSQLNQRARHLLEDVFPQVWVEGEISNLARPASGHLYFTLKDS
QAQVRCALFRQNALKVRQALRDGLAVKVRGKVSLFEGRGDYQMIADAVEPAGDGALRLAF
EALKEKLAGEGLFATERKRPLPAHPQRVGIVTSPTGAVIRDIISVFRRRAPQVSLTLVPT
AVQGREATAQIVRALALADAQGFDALILARGGGSLEDLWCFNEEAVARAVAACKTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLRQRLEGLERRLLLRMRQLIAHQHLR
LDGLTRRLRHPGERLRQQAQRLDDLEMRLQRALDRQVSQRRERLARLETRLAAQHPGRAL
GLLRQRLDALAARLPRAMRETLGTRRLELQSLVQTLHAFSPLATLGRGYSILLDERGQAI
RSASQTQPGQRLKARLGEGELEVRVEDNHLAPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggaccccttccaacggctgggcctcgatcgcgaggtgctgaccgtcagccaa
ctgaaccagcgtgcccgccacctgctggaggacgtgttcccccaggtctgggtggaaggc
gagatctccaacctcgcccggcccgcatccggccacctctatttcaccctcaaggacagc
caggcccaggtgcgctgtgcgctgttccggcagaacgccctcaaggtgcgccaggccctg
cgtgacgggctggcggtgaaggtgcggggcaaggtctcgctgttcgaaggccgtggcgac
taccagatgatcgccgacgccgttgagccagccggtgacggcgccctgcgcctggccttc
gaagcgctcaaggagaagctcgccggcgagggcctgttcgccaccgagcgcaagcgcccg
ctgccggcacacccccagcgcgtgggcatcgtcacctcccccaccggcgcggtgatccgc
gacatcatcagcgtgttccgccgccgtgcgccccaggtcagcctgaccctggtgcccacc
gccgtgcagggccgtgaagccaccgcgcagatcgtccgcgccctggccctggccgatgcc
cagggcttcgacgcgctcatcctggcccggggcggcggctccctcgaagacctctggtgc
ttcaacgaagaggccgtggcccgcgccgtcgccgcctgcaagacccccatcgtcagcgcc
gtgggccacgagacggatgtgtccatcagcgacttcgtcgccgacgttcgcgcgccgacg
ccctctgcggccgccgagctgctggcaccggactccagcggcctgcgccagcgcctggag
ggcctggagcgccgcctgctgctgcgcatgcgccagctgatcgcccaccagcacctgcgc
ctggacgggctgacccgacgcctgcgccacccgggcgaacggctgcgccagcaggcccag
cgcctggatgacctggagatgcgcctgcaacgcgccctcgaccgccaagtgagccagcgc
cgcgagcgcctggcccgcctggagacgcgcctggcggcccagcacccggggcgcgccctc
ggcctgctgcgccagcgcctcgacgccctggccgcgcgactgccccgggccatgcgcgaa
accctcggtacccgtcgcctggaactgcagagcctggtgcagacgctgcacgccttcagc
cccctggccaccctcggccgcggctacagcatcctcctcgacgagcgcggccaggctatc
cgcagcgccagccagacccagcccggccaacgcctcaaggcacgcctcggcgaaggtgag
ctggaggtacgggtcgaggacaaccatctggcccccgtcaccctctcactgctggactga
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