Metapseudomonas otitidis: PtoMrB4_47480
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Entry
PtoMrB4_47480 CDS
T06890
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_47480 (phr)
Enzymes [BR:
poj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PtoMrB4_47480 (phr)
DNA repair and recombination proteins [BR:
poj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PtoMrB4_47480 (phr)
Prokaryotic type
PtoMrB4_47480 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCA30771
UniProt:
A0A679GHK5
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All DBs
Position
5140941..5142371
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AA seq
476 aa
AA seq
DB search
MQQLIWFRCDLRVHDNTALTAALQAGPTLALFLVSPGQWQAHDDAAAKVDFWLRNLVELQ
RELQALNVPLLVRHIDHWDEAPETIARLCREHAVGGVQVNEEYGIHEQRRDEAVRARLAR
DGITLHSHLDQLLFRPGSVLTRTGGYFQVYSQFRKVCYERLHSALPPCLPLPAAQAPLTV
PSDPLPEAVDGFPTPPQSLRELWPAGERAALARLAAFAEDDLHGYRDRRDLPAEPGTSQL
SPYLAAGVVSPRQCLHAALTQNRGEFDSGSEGAVTWINELLWREFYKHILVGYPRVSRHR
AFRPETEALPWRDAPADLEAWQQGRTGVPIVDAAMRQLLATGWMHNRLRMITAMYLTKNL
LIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRVFNPVTQSRRFDPKARFL
RQWLPELGRLDDDAVHDPSALGGLFGVQGYPRPLVDLAASRDRAIAAFRDLPKEPR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactgatctggttccggtgcgacctgcgggtccacgacaacaccgccctgacc
gccgccctccaggccggcccgaccctcgccctgttcctggtcagccccggccagtggcag
gcccacgacgacgcagcggccaaggtcgacttctggctgcgcaacctcgtcgaactgcaa
cgcgaactgcaggccctgaacgtaccgctgctggtgcgccacatcgaccactgggacgaa
gcccccgagaccatcgcccgactgtgccgcgagcacgccgtgggcggcgtccaggtcaac
gaggaatacggcatccacgagcagcgccgggacgaggccgtgcgcgcccgcctggcccgc
gacggcatcaccctgcacagccacctcgaccagttgctgttccgccccggcagcgtgctg
acccgtaccggcggctacttccaggtctacagccagttccgcaaggtctgctacgagcgc
ctgcacagcgccctgcctccgtgcctgccgctgcccgccgcccaggcgccgctgactgtg
cccagcgacccgctgccggaagccgtggacggcttcccgaccccgccgcagagcctgcgc
gagctgtggcccgccggtgaacgcgcggccctggcccgcctggcggccttcgccgaagac
gacctgcacggctaccgtgaccgccgcgacctgcccgccgagcccggcaccagccagctc
tcgccctacctcgcggccggcgtggtctccccgcgccaatgcctgcacgccgccctgacg
cagaaccgcggcgagttcgacagcggcagcgaaggtgccgtgacctggataaacgaactg
ctctggcgcgagttctacaagcacatcctggtgggctacccccgcgtcagccggcaccgc
gccttccgcccggagaccgaagcgctgccctggcgcgatgccccggccgacctggaggcc
tggcagcagggccgcaccggcgtgcccatcgtcgacgccgcgatgcgccagttactggcc
accggctggatgcacaaccgcctgcgcatgatcaccgccatgtacctgacgaagaacctg
ctcatcgactggcgcgagggcgagcgctggttcatgcgccacctgatcgacggtgacctg
gccgccaacaacggcggctggcaatggagcgcctccaccggcaccgactccgtgccctac
ttccgcgtgtttaacccggtcacccaatcccgtcgctttgatcccaaggcacgcttcctg
cgccagtggctgccggagctgggccgcctggacgacgacgccgtgcacgacccgtccgcc
cttggcgggctgttcggcgtgcagggctacccgcgcccgctggtggacctggcggccagc
cgtgaccgcgccatagccgccttccgcgacctgcccaaggagccccgctga
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