Metapseudomonas otitidis: PtoMrB4_48360
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Entry
PtoMrB4_48360 CDS
T06890
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PtoMrB4_48360 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poj03019
]
PtoMrB4_48360 (pcnB)
Enzymes [BR:
poj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PtoMrB4_48360 (pcnB)
Messenger RNA biogenesis [BR:
poj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PtoMrB4_48360 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
BCA30859
UniProt:
A0A1I0UUP4
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All DBs
Position
5233808..5235208
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AA seq
466 aa
AA seq
DB search
MLKKLIQSFRSPLRRTQHPRSTPEVLSNRQHALDRADISRNAVNVVERLQKAGYQAYLVG
GCVRDLMLGLDPKDFDVATNATPEQVRAEFRNARVIGRRFKLVHVHFGREIIETATFRAN
HPQGDDEDSNQSSRNESGRILRDNVYGNQEEDAQRRDFTINALYYDPVTERVLDYAHGVH
DIRNRLIRLIGDPEQRYLEDPVRMLRAVRFAAKLGFEIEKHSAAPIRRLAPMLRDIPSAR
LFDEVLKLFLGGKAERTFELLLEYDLFAPLFPAAAASLERDPEYAGALIRQALANTDERI
RLGKPVTPAFLFAALLWPALPVRAALLQEKGMPPIPAIQEAAHGLILEQCQRTAIPKRFT
IPIREIWDMQERLPRRSGKRADLLLENPRFRAGYDFLLLRESAGEETGGLGDWWTDYQDA
SDSERRAMIRDLSSRDEGGAAPRKRRRGGGRRKRGPRSEGSAPAGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgatccagtcctttcgctctcccctgcgccgcacccagcatccccgc
agcacacctgaagtcctgagcaaccgccagcacgcgctggaccgcgcggacatcagccgt
aacgcggtgaacgtcgtggaacgcctgcagaaggcgggctaccaggcctacctggtcggc
ggctgcgtccgtgacctcatgctgggcctggacccgaaagacttcgacgtcgccaccaac
gcgacccccgagcaggtgcgtgccgagttccgcaatgcccgggtgatcggccgccgcttc
aagctggtccatgtgcatttcggccgggaaatcatcgagaccgcgaccttccgcgccaac
cacccccagggtgatgacgaagacagcaaccagtcctcgcgcaacgaaagcggccgcatc
ctgcgtgacaacgtctacggcaaccaggaagaagacgcgcaacgccgcgacttcaccatc
aatgccctctattacgacccggtcaccgagcgcgtgctcgactacgcccacggcgtgcac
gacatccgcaaccgcctgatccgcctgatcggcgaccccgagcagcgctacctggaagac
ccggtgcgcatgctgcgagccgtgcgcttcgccgccaagctgggcttcgagatcgagaag
cacagcgccgcaccgatccgccgcctggcccccatgctgcgggacatcccctccgcacgc
ctgttcgacgaagtcctcaagctgttcctcggcggcaaggccgagcgcaccttcgaactg
ctgctggagtacgacctcttcgccccgctgttcccggcggcagccgcctccctggagcgc
gaccccgagtacgctggcgccctgatccgccaggccctggccaacaccgacgagcgcatc
cgcctcggcaagccggtcaccccggccttcctcttcgccgccctgctctggccggccctg
cccgtccgtgccgccttgctgcaggaaaagggcatgccgccgatcccggcgatccaggaa
gccgcccacggcctgatcctcgaacagtgccagcgcaccgccattcccaagcgcttcacc
atcccgatccgcgagatctgggacatgcaggaacgcctgccccgccgcagcggcaagcgt
gccgacctgctgctggagaacccccgcttccgcgccggctacgacttcctcctgctgcgt
gaaagcgcgggcgaggaaaccggcggcctgggcgactggtggaccgactaccaggacgcc
agcgacagcgaacgccgcgccatgatccgcgacctcagcagccgcgacgaaggcggtgcc
gcaccgcgcaagcgtcgccgtggcggcggtcgtcgcaagcgcggcccccgcagcgaaggc
agcgccccggctggcgaataa
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