Metapseudomonas otitidis: PtoMrB4_48570
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Entry
PtoMrB4_48570 CDS
T06890
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poj03016
]
PtoMrB4_48570 (truB)
Enzymes [BR:
poj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PtoMrB4_48570 (truB)
Transfer RNA biogenesis [BR:
poj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PtoMrB4_48570 (truB)
Prokaryotic type
PtoMrB4_48570 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BCA30880
UniProt:
A0A679GUQ7
LinkDB
All DBs
Position
complement(5257531..5258448)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRDVSGILILDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGVTTTTGDAEGEVIERRDVTVGRDELEAALGRFRGEIQ
QVPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLAFDSTKATLSVSCSKGTYI
RTLVEDLGQVLGCGGHVAELRRTQAGPFNLSQAISLEELEKAHAEGGNEALDRFLLPSDS
GLEHWPLVQLSEHSAYYWLHGQPVRAPEAPKFGMLRVQDHTGRFIGIGEVSDDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaagtcaagcgtatccgccgtgatgtgagcggcatcctcatcctcgacaagccc
cgtggcatgagctccaaccaggccctgcagaaggtccgctggctgctcaatgcggagaag
gccggccacaccggcagcctcgatcccctggccacgggcgtgctgcccctgtgcttcggt
gaagccaccaagttttcccagtacctcctggatgccgacaagggctacgagaccgttgcc
cagctgggcgtcaccaccaccaccggcgatgccgagggcgaggtgatcgaacggcgcgac
gtgaccgttggtcgcgacgagctggaggcggccctggggcgcttccgtggtgaaatccag
caggtgccgccgatgtactcggccctgaagaaggacgggcagcccctctacaagctggca
cgtgccggcgaagtagtggagcgcgaggcgcgttctgttactattgcgcgcctggaactg
ctggccttcgattccaccaaggccacgctttccgtcagttgcagcaaaggcacctacatt
cgcaccctggtcgaggaccttggccaggtgctggggtgtggtggccacgtcgctgaactg
cgtcgcacccaggccggccccttcaacctgtcccaggccatcagcctcgaggaactggag
aaggcccacgccgaaggtggcaacgaagcgctcgaccgcttcctgctcccctccgacagt
ggcctggagcactggcccctggtgcaactgagcgaacacagtgcctattactggctgcat
gggcagccggtaagggctcccgaagcgccgaagttcggcatgctgcgggtgcaggatcac
accggtcgcttcatcggcatcggtgaagtgagcgatgacgggcgcatagcgccacgtcga
ctgattcggtcggaatga
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integrated database retrieval system
