Metapseudomonas otitidis: PtoMrB4_48600
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Entry
PtoMrB4_48600 CDS
T06890
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poj03021
]
PtoMrB4_48600 (nusA)
03009 Ribosome biogenesis [BR:
poj03009
]
PtoMrB4_48600 (nusA)
Transcription machinery [BR:
poj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PtoMrB4_48600 (nusA)
Ribosome biogenesis [BR:
poj03009
]
Prokaryotic type
rRNA transcription factors
PtoMrB4_48600 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
T6SS_Tse3_N
KH_NusA_C
KH_KhpA-B
DUF2187
Motif
Other DBs
NCBI-ProteinID:
BCA30883
UniProt:
A0A1I0UBW0
LinkDB
All DBs
Position
complement(5261496..5262977)
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPAGVIFEALELALATATKKRFEDEVDLRVSINRHTGSYDTFR
RWAVVDDENFEDPAIQLTLDQAQARDENAKIGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVEAYREKLGDIISGTVKKVTRDNVIVDLGNNAEALLAREDIIPRETFRVGAR
VRALLKEIRTENRGPQLILSRTAPQMLIELFRIEVPEIAEELIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMAPAEVAAIIV
DEDAHAMDIAVAEDNLAQAIGRGGQNVRLASQLTGWTLNVMTEADIQAKQQAETGDIMQS
FVDELGVDEELAQVLVEEGFTSLEEIAYVPMEEMLSIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAQPAEDLLELEGMDKELAVELAVRGVINREDLAEQSIDDLLDIDGMDEERA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgtagagtcggtatccaacgagaaaggggtgccggca
ggtgtgattttcgaagcgctggagctggcactggccaccgctaccaagaagcgcttcgag
gacgaggttgacctgcgtgtgtccatcaaccggcacaccggtagctatgacactttccgc
cgctgggcggtggtggacgacgagaacttcgaggatccggccatccagctgaccctcgac
caggcccaggcccgtgacgagaatgccaagatcggcgacgtcatcgaagagaagatcgaa
tccatcgagttcggccgcatcgctgcccagaccgccaagcaggtcatcgtgcagaaggtg
cgcgaagccgagcgtgcacaggtggtcgaggcctatcgcgagaagctgggcgacatcatt
tccggtacggtcaagaaggtcacccgtgacaacgtgatcgtcgacctgggcaacaacgcc
gaggcgttgctggcccgtgaggacatcatcccccgtgagaccttccgcgtcggcgcccgt
gtccgggccctgctgaaggaaatccgcaccgagaaccgtggtccgcaactgatcctctcg
cgcaccgcgccgcagatgctgatcgagctgttccgcattgaagtgccggaaatcgccgaa
gagctgatcgaagtgatggccgcctcccgtgacccgggttcgcgcgccaagatcgccgtt
cgctccaaggacaagcgcatcgacccgcagggcgcctgcatcggcatgcgtggctcccgc
gtccaggctgtttctggcgagctgggcggtgagcgtgtcgatatcgtcctgtgggacgac
aaccccgctcagttcgtcatcaacgccatggctccggccgaagtggcggcgatcatcgtc
gacgaagatgcccatgccatggacatcgccgttgccgaggacaacctcgcccaggccatc
ggccgtggcggccagaacgttcgcctggccagccagctgaccggctggaccctgaacgtg
atgaccgaggcggacatccaggccaagcagcaggccgagaccggcgacatcatgcagtcc
ttcgtcgatgaactcggcgtggatgaagagctggctcaggtgctggtggaggaaggtttc
accagcctcgaagagatcgcctacgtgcccatggaagagatgctgagcatcgatgggttc
gacgaggacatcgtcaacgagctgcgcgcccgcgccaaggatcgcctgctgaccaaggcg
atcgcgaccgaagagaagctggccgatgcccagcccgccgaggacctgctggaactcgag
ggcatggacaaggagctggcggtcgaactggcagtgcgtggcgtaatcaatcgcgaagac
ctggccgagcagtcgatcgacgacctgctcgacatcgacggcatggacgaagagcgtgcc
ggcaagctgatcatggccgcccgagcccattggttcgagtaa
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