Metapseudomonas otitidis: PtoMrB4_52130
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Entry
PtoMrB4_52130 CDS
T06890
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
poj
Metapseudomonas otitidis
Pathway
poj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PtoMrB4_52130 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poj03400
]
PtoMrB4_52130 (priA)
Enzymes [BR:
poj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PtoMrB4_52130 (priA)
DNA repair and recombination proteins [BR:
poj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PtoMrB4_52130 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
HypA
AAA_30
Zn_ribbon_6
AAA_22
AAA_16
Zeta_toxin
AAA_19
TrwB_AAD_bind
PIF1
Zn_ribbon_3
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
BCA31236
UniProt:
A0A679GIR0
LinkDB
All DBs
Position
5655406..5657625
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AA seq
739 aa
AA seq
DB search
MPSPILRLALPSPLRRLFDYRAPAGVAPAALQPGIRVRVPFGRREVIGVLVEVTDRSEVP
EDKLRPALALLDRQPPLPAPLFQLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWHACEGARADDPRLARAPRQRQALAILAQHPHGVAHQLLAQLQLNKDSLDLLLEKGLAR
VETRRHAPAPRHEHWLAQAELPLNGEQRAAFDAVQSSFGQFNAFLLAGVTGSGKTEVYLQ
LIRETLQAGKQALVLIPEINLGPQTLERFSRRFNARVALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIVDEEHDASYKQQEGLRYHARDLAIVRARQENVPILLGS
ATPSLESLQNAYAGRYGLLRLTQRAGGARQPRFLRLDVKSRPLDSGISGPLQQAIQQTLE
AGQQVLVFLNRRGFSPTLLCHDCGWISQCTRCDARMTLHQRHNELRCHHCGHVQRRPDNC
PDCGKVDLRPIGAGTERAEERLGILFPQFPVLRIDRDSTSRKDAMAQLFGTINKGEPCIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGRVII
QTHLADHPLLVQLTEEGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEAFLDSA
CAEAEQQLAELHLSGVELLGPVPAPMERRAGKHRAQLLLQANSRATLHRLLTPWSQALEQ
LPGGRAVRWSLDVDPIDLF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagccccatcctgcgactcgccctgccctcgcccctgcgccgcctgttcgactac
cgcgcccctgccggcgtggccccggccgccttgcagcccggtatacgcgtgcgggtgccg
ttcggccgtcgcgaagtcatcggcgtgctggtggaagtcaccgaccgcagtgaagtcccg
gaggacaagctccgccccgcgctcgccctgctggaccgccagccgccattgccggcgccg
ctgttccagctctgcctgtggacggcccagtactaccagcacagcctcggcgacaccctc
agctgggcactccccgtgctgctgcgccagggcgaaccggccgaagcccgccaggagcgc
ttctggcacgcctgcgaaggcgcccgcgccgacgacccgcgcctggcccgcgcaccacgc
cagcgccaggccctggccatcctcgcccagcacccccatggcgtcgcccaccagctgctc
gcacagctgcagctgaacaaggacagcctcgacctgctgctggaaaagggactggcgcgc
gtggagacccgccgccatgcccccgcgccacgccacgaacactggctggcccaggccgaa
ctgccactcaacggcgagcagcgggccgccttcgacgcggtgcagtcctccttcggccag
ttcaacgccttcctgctcgccggcgtcaccggcagcggcaagaccgaggtctacctgcaa
ctgatccgcgagaccctgcaggccggcaagcaggccctggtgctgatccccgagatcaac
ctcggcccgcagaccctcgaacgcttctcccggcgcttcaacgcccgcgtcgccctgctg
cactccgccgtcaacgaccgcgaacgcctggacgcctggctcgccgcccgcgatggcgag
gccgacatcatcatcggcacccgctcggccctgttcacccccatgaagaacccggggctg
atcatcgtcgacgaagaacacgacgcttcctataaacagcaggaaggcctgcgctaccac
gcccgcgacctggccatcgtccgcgcccgccaggagaacgtgccgatcctgctgggctcc
gccaccccctcgctggaaagcctgcagaacgcctacgccggccgctacggcctgctgcgg
ctgacccagcgcgcaggcggcgcccggcagccgcgcttcctgcgcctagacgtgaagagc
cgcccgctcgacagcggcatctccggcccattgcaacaggccatccagcagaccctggag
gccggccagcaggtgctggtcttcctcaaccgccgaggcttctcacccaccctgctgtgc
cacgactgcggctggatcagccagtgcacccgctgcgacgcccgcatgaccctgcaccag
cgccacaacgagctgcgctgccaccactgcggccatgtccagcgccgcccggacaactgc
cccgactgcggcaaggtcgacctgcgccccatcggcgccggcaccgaacgcgccgaagaa
cgcctcggcatcctcttcccgcagttccccgtgctgcgcatcgaccgcgacagcacctcg
cgcaaggatgcgatggcccagctgttcggcaccatcaacaagggcgagccctgcatcctc
gtgggcacccagatgctcgccaagggtcaccacttcccccgggtcaccctggtggcgatc
cttgacgccgatggcggcctgttctccgccgacttccgcgccagcgagcgcatggcccag
ctcatcgttcaggtggccggtcgcgccggccgcgcggaggaaccgggccgggtgatcatc
cagacccacctggccgaccacccgctgctggtgcagctcaccgaagagggctacttcgcc
ttcgccgagcaggccctctccgagcgccgcgccgccggcctgccgcccttcgcccacctg
gccctgctgcgggccgaagcgcacaagcccgggcaggccgaagccttcctcgacagcgcc
tgtgccgaagccgaacagcagctggccgagctgcacctcagcggtgtcgagctgctcggc
cccgtccccgcacccatggagcgccgcgccggcaagcaccgcgcccagctgctgctccag
gccaacagccgcgccaccctgcaccgcctgctcacgccctggtcccaggccctggaacag
ctccccggcggccgggccgtacgctggtccctggatgtcgacccgatcgacctgttctga
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