Metapseudomonas otitidis: PtoMrB4_54010
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Entry
PtoMrB4_54010 CDS
T06890
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poj03000
]
PtoMrB4_54010
Transcription factors [BR:
poj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PtoMrB4_54010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
HTH_24
HTH_23
HTH_Tnp_ISL3
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BCA31424
UniProt:
A0A679H033
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All DBs
Position
5856967..5858001
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AA seq
344 aa
AA seq
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MSSPRKRRGAGRVTLSAVAERVGVSAITVSRYFNQPEQVSEELRGRIETAVAELGYVPNL
VAGGLASARGRIVGMVIPNISGPIFANTIQGFSDTLARHGYQLLLASSYFSEEQEESAVR
AFLGWSPAALVVTSHFHSPGTEKMLAEADIPVVEVWDYQPERAPMQVGFLHRDVGVAAAR
YLLDKGHTRIAFVQNSAAGDFSALDRRDGYADTLRAAGHEPWVFVPSSGLAPFEAGKQAM
EALMKRSPRLDAIIFANDNLAAGGLLAGQRAGLDLPGDCAVMGFGDYPFAEMLLPSLTTI
RPPALEIGERAATRVLEALGVLPVEGEVERLNLLDCQVIARESA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccccgcaagcgccgaggcgcgggacgcgtcaccctcagcgccgtggccgag
cgcgtcggcgtgtccgccatcaccgtgtcgcgctacttcaaccagccggagcaggtctcc
gaggaactgcgcgggcgcatcgaaacggcggtggccgagctgggctacgtgcccaacctg
gtggccggcggcctggcctcggcgcgcgggcgcatcgtcggcatggtcatccccaacatc
tccgggccgatcttcgccaacacgatccagggcttcagcgacaccctggcgcgccacggc
taccagctgctgctggcctccagctacttctccgaggaacaggaagagagcgccgtgcgc
gccttcctcggctggtcgccggcggccctggtggtcaccagccatttccacagccccggc
accgagaagatgctcgccgaggcggacatcccggtcgtcgaggtctgggactaccagccc
gagcgcgcgcccatgcaggtggggttcctccaccgcgacgtgggcgtcgccgccgcccgc
tacctgctggacaaggggcacacgcgcatcgccttcgtgcagaacagcgccgccggcgac
ttcagcgccctggaccgccgcgacggctacgccgacaccctgcgtgccgccggccacgag
ccctgggtcttcgtgcccagcagcgggctggcgcccttcgaggccggcaagcaggccatg
gaggcgctgatgaagcgctccccacggctggacgcgatcatcttcgccaacgacaacctc
gccgccggtggcctgctcgccggccagcgggcgggcctggacctgccgggcgactgcgcg
gtgatgggcttcggcgactacccgttcgccgagatgctgctgcccagcctcaccaccatc
cgaccgccggcgctggagatcggcgagcgcgccgccacccgggtgctggaggcactgggc
gtgctgccggtggagggcgaggtggagcgcctgaatctgctcgactgccaggtcatcgcc
cgggaaagcgcgtag
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