Metapseudomonas otitidis: PtoMrB4_54060
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Entry
PtoMrB4_54060 CDS
T06890
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poj03000
]
PtoMrB4_54060
Transcription factors [BR:
poj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PtoMrB4_54060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BCA31429
LinkDB
All DBs
Position
5861581..5862501
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AA seq
306 aa
AA seq
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MQIDDELTLKKLETFLAFMRAGNLSRAAAALGTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAYVLEEKAQKLVQDVLDMVRLTREAAGFSAERFKLGALYSLTVKTVPQLVMGLK
IRRSELNIDLTLGSNADLLYRLKNLELDAMLVSLDESVSDPDCEQLPLFSDDIFLAVPTD
SPFAEQPEVDLADLADSTFITLTQGFATHRDGARVFQQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQARYRLQQHIGVVFLKARERDPNLLALLAECRMYS
LRQGPH
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgacgacgagctgaccctgaagaaactggagaccttcctcgccttcatgcgc
gcgggcaacctgtcccgcgcggcggcggcgctgggcaccagcaacgtcagcgtgcaccgc
gccatccactccctggagagtgccctgcgctgcccgctgttcaagcacgaggggcgcaac
ctgacgccgctggaaagcgcctacgtgctggaggagaaggcccagaagctggtgcaggac
gtgctcgacatggtgcgcctgacccgcgaggcggcgggcttttccgccgagcgcttcaag
ctcggtgcgctctattcgctgacggtgaagaccgtgccgcaactggtgatgggcctgaag
atccgccgcagcgagctgaacatcgacctcaccctgggctccaacgccgacctgctctac
cgcctgaagaacctggagctggacgccatgctggtgtccctcgacgagagcgtcagcgac
ccggactgcgagcagctgccgctgttctccgacgacatcttcctcgccgtgcccaccgac
tcgcccttcgccgagcagccggaggtggacctggcggacctggccgactccaccttcatc
accctcacccagggcttcgccacccaccgcgacggcgcgcgggtgttccagcaggcgggc
ttcgagccgaaggtggcgatgcaggtgaacgacatcttcaccctgctcagcatggtcagt
tccggggtcggctacgccctgctgcccgggcgcattgcggcggtgtacgagaaccgcgtg
aagctcatcccgctgcaggcgcgctaccgtctgcagcagcacatcggcgtggtcttcctc
aaggcccgcgagcgcgaccccaacctgctcgcgctgctggccgaatgccgcatgtacagc
ctgcggcagggcccgcactga
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