Metapseudomonas otitidis: PtoMrB4_54780
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Entry
PtoMrB4_54780 CDS
T06890
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
poj
Metapseudomonas otitidis
Pathway
poj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PtoMrB4_54780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_9
Cadherin_5
Big_3_3
Motif
Other DBs
NCBI-ProteinID:
BCA31501
UniProt:
A0A679GJ81
LinkDB
All DBs
Position
5953154..5960287
Genome browser
AA seq
2377 aa
AA seq
DB search
MAQPGALYLLDTSSQGDTLLWPEMQRRGQDLELGTEQPWLVIQDFFSTPGTLGVRGHDGS
HHIYVSAEALEARLDDGATLQFSPGPEPIATALLSATPFAHVPRPTLLNILDDIGTIQGS
VAHLQATDDNRPTLQGTARPGDRILIKDGDRKLGETVTDDQGNWSFTPRTPLAEGRHDFT
IQAQDPQGDLSEPSDVHSLIVDRTAPRRPSIDDLYDDQGQITGPIPQGGSTDDARPSISG
TAEPLATVVVLDRGQEVGRTQALADGSWSLTPSIPLSQGIHSLTALAIDQAGNTSQPSDA
FELQVLSAQPPAAPSIDELQDTAGRVTGSIPRDGLTDDPRPLVRGSATAGLKVTLYANGK
AIGSAFADQNGQWSITPPAALESGAITLTAVAQSEAGNFSRESLPYGFKLTTGLPDTPQL
LEIRDDAGLDHGPIADRQATDDARPTFIGKGAAGQRILIHDQGQLVGETRVDSRGNWRFT
PKSNLAEGEHSFTITAMDATGATSITTPPHRLSIDTSPPARPQVIDLQDNQGDLTGSIAL
NGVTDDAQPILTGTGEPHATVRVYDNGREIGRTTIGANGQWTFEPTRPLELGEHILSARV
FDQADNASALSDLLPFTVLPGGQPQAPTITGVVDDQGSIVGPVSQGGETDDTLPLVRGIA
EPNMVITLYANGSEVGRTTSNTSGQWSLEPSSPLPEGTIVFTAKATSPAGNTSTESNGYS
IIIDITAPGLPELLDVIDDVGSIQGSVPHLGTTDDTLPTLVGSGQPGARVLIRDNGQPLG
EATVDALGNWQFVPPYRLPEGTHTFTILAVDAAGNRSQESPPRTLIVDTTAPDRPVILSV
LDDQGDVTGPVLPGGITDDAQPLISGTAEAGSTLVLYDNGIEIGRTLVESNGTWLFEPSS
PLSGGAHSLTARAMDAAGNTSAASLPHGFTLVTGGRPLAPSIDGLIDDQGDLTGSIPSGG
ITDDAQPQVTGRGQPNTTLVLFDNGREIGRTTVEANGTWTFEPKSPLTTGPHALKAQVID
SAGNASPWSPDYTFTLVAAGQPNAPTIEGVYDDQGSIIGNVPRGGVTDDAQPQLNGKAPA
HSTVTVKANGQIIGTTTADANGTWLLTPATPLADGPQTLTAQSTNTAGNTSAPSTDYVIV
IDTIAPETPSLQKVLDDVGPLQGPIPHQGITDDNRPTLTGNGQPGDRILIKDNGQVIGEV
IVDSNGSWQYVPPKALTDGQHDFVLQAVDAAGNLSIESKPHTILVDTRAPDRPAIERVFD
DQGSITGPIAQGGTTDDARPLISGTAEPLSTLVVYDAGREIARTQTDANGRWSVEPTLPL
ADGEHRLSAIAIDQAGNASLPSADHVFSVDTLAPARPVITQVFDDQGDVTGPLNPGDTTD
DSRPLISGTAEANTTLVVFDNGVEIGRARVDTNGQWTFEPSLPMPLGSHNLSAQSINTAG
NTSLPSNAFAFTLASSSRPSSPTIESVYDDQGSIIGNVPRGGVTDDARPLIQGSAGAGLT
VMVLANGKVIGSTVAGSDGKWSFEPGTDLADGLQNITAKAASATGNLSLDSARYPIQVDT
QAPASAKQKLMDDVGPVQGEITPGTVTDDNRPTFIGTAEPGSTIIIYDWGMEIGRTTAAG
NGAWTFTPADALTDGLHSFSTQVQDIAGNRSDESAPLDFQVDTYVPQAVALISQMTKDSG
TDTQDFRTNDGSAGRLVSGSVQGQLGFGERIQVSVDNGASWHDALDLGNGRWSYTDHTPH
QSDWAIQTRVIDDAGRTGPVEIKNVVLDQWVTPPTDVSWANGVLTVSFNGGDFRVGSLIE
ATVDGTAISHRLSAQEIANGRANLSAPNAGTPPAVYGASMVDEVGNLSQQLTVSSALGLE
QSFNAAGHYLPLFKDFSYDVGTMVITGERYDRNVLQGIFGPNYRNPTLLPISKPVLMVSD
IVTLDLKVGSASRLQCNISENHFMSSLPPGEYDTTRFYGTFSLNFYNEQGTMVHSHSVQF
NGRQFGESLDIRMLEGVTFSKVSLQVSSQYAINQSFITLDDIRFEVTSGDYTRLYEQNFD
NTSHANLNSTNKAIDLGGFVIRDEGLRTTAQQGIFNGTWIENSYYKLSTPVTGSALFITE
KVALELKSTTANRFTAKLGDLLGESVNLTFYDASGKAVHFLNLRNDKLDNTLHNIDVRLP
NGQTFTQVKVQVFNDPGIDGKAPLIWLDELKFHGVSGEIGGTPSGSNTIELLPPPSEQSV
QTAHPYYGGDSNNTFLLADIRILNGPGASINGGEGMDCITLTGAGQVMDLTALAGKVRSI
EVLDITGSGNNTLKLSAADVLSQGQTDLFHNSGHVQMLVKGDAGDLVQLQKQAGANDGGR
WQSQGNVNVDGVGYQVWQHSSLEAELLVQMGVTTQLV
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccggcgcactttacctgctcgacacaagcagccagggcgacactctactc
tggcccgaaatgcaacgccggggtcaggaccttgagctaggcaccgagcagccctggctg
gtcatccaggattttttcagcaccccaggcaccttgggagtgcgtggacatgatggctcg
caccacatctatgtcagcgctgaggccctggaggcccgcctggatgacggagccacactc
cagttctcgccggggccggaaccaatcgccacggcactgttgtctgctacccctttcgcc
catgttccgcgccccaccttactcaacatccttgacgatatcggtacgatccagggctcc
gtcgcccacctacaggcaaccgatgacaaccgcccaaccctgcagggcacggcccggcct
ggtgatcgcattctgatcaaggatggtgatcgcaagctgggggaaaccgtcaccgacgac
caaggcaactggagcttcaccccccgcaccccattggccgagggccgccatgacttcacc
atccaggcgcaagatccacagggcgacctcagcgagcctagcgatgtccacagcctgatc
gtagatcgcacggcccccaggcggcccagcatcgacgacctctacgacgaccaggggcag
atcaccgggccgattccccagggcgggagtaccgatgacgcccgtcccagcatttccggt
accgctgaacccctggccactgtagtcgtgctcgaccgcggtcaggaagtggggcgcacc
caagccctggcggatggatcctggagcctgacgccatccatccccctgtcgcaggggatc
cacagcctcactgcccttgcaattgaccaggccggcaacaccagccaaccctccgacgct
ttcgagttgcaggtgctgtctgcccagccacccgccgcccccagcatcgacgaactccag
gatacggccggacgtgtgactggcagcattccacgtgacggcctgaccgatgatccccgt
ccgctggtacgcggcagcgcaaccgcaggcctgaaggtcaccctctacgccaatggcaaa
gccatcggcagcgctttcgccgaccagaacggccaatggtccataacccctcctgccgcc
cttgaaagcggggcgattaccttgaccgccgtggcgcaaagcgaagcggggaatttcagt
cgtgaaagcctcccctatgggttcaagctgaccactggcctgccggacaccccgcaactg
ctggaaattcgcgatgacgcaggcttggaccatggccccattgccgatcgccaagccact
gacgacgcccggccaaccttcatcggcaagggtgccgctggccagcgcatcctgatccat
gaccaaggacaattggtgggcgaaacccgcgtggacagccggggcaactggcgctttacg
cccaagtccaacctggccgagggtgaacacagtttcaccatcacggccatggatgccacc
ggggccaccagcatcacaacaccaccccaccgcttgtcgatcgacacctcgccacccgcc
cgcccgcaggtaatcgatcttcaggacaaccaaggcgacctgaccggcagtatcgcgctc
aacggcgtgaccgatgatgcgcaacccattctgaccgggaccggcgaaccccatgccacg
gtccgtgtctacgacaacggccgtgagattggccggaccaccatcggcgcaaacggccag
tggaccttcgagccgacccgaccgctggagctgggcgagcacattctttcagcccgggtc
ttcgaccaagccgacaacgccagcgcattgtccgacctactgccctttaccgtattgccc
ggcggccaaccgcaggcgccgaccatcactggcgtggtcgatgaccagggcagcatcgtc
ggcccagtcagccaaggcggcgagaccgacgatacgctgccgctggtccgcgggatcgcg
gaacccaacatggtcatcacgctctacgccaatggcagtgaggtgggacgaaccacctcc
aataccagtggccaatggtctctggaaccgagcagcccgttgcccgagggcaccatcgtc
ttcacggccaaggccaccagcccagccggcaacaccagtaccgagagcaacggctattcg
atcatcattgacatcaccgcaccgggcttgcctgaactcctggacgtcattgatgacgtt
gggtcgatccaaggctccgtacctcacctgggcaccactgacgacaccctgcccaccttg
gtcggttcaggccagccgggtgcgcgggtactgatccgcgacaacggccagccccttggt
gaagccacggtcgatgcactcggaaactggcagttcgtacccccctatcggctgccagaa
ggcacgcacaccttcaccatcctggcggttgacgcggcgggtaatcgcagccaggagtcc
ccccctcgcacactcatcgtcgacaccaccgcgccggaccgcccagtcatcctttcagtc
ttggacgaccagggtgatgtcaccggcccagtgctacctggtggcatcacggacgacgca
cagccgctgatcagcggcactgccgaggcgggttcgacccttgtgctctacgacaacggc
atcgagatcggccgcaccctcgtggaaagcaacggtacctggcttttcgagccttccagc
ccattgagcggtggcgcgcacagtctcaccgcacgcgccatggatgctgccggtaatacc
agtgcagcctccctcccccatgggttcaccctcgttacaggcgggcgcccgcttgcgccc
agcatcgacggcctgattgacgaccagggcgatctcacaggttccattccctcaggcggc
atcactgacgacgcacagcctcaggtaacaggacgaggccaaccaaacaccacgctcgtg
ctgttcgacaacggccgcgagatcggtcgcaccacggtcgaagccaacggcacctggaca
ttcgaacccaagtcgcctctgaccacagggccgcatgcactcaaggcgcaggtcatcgac
agtgccggcaacgctagcccctggtcgccggactacacctttaccctggtcgctgccggg
cagcccaatgcgccgaccatcgaaggggtttatgacgaccagggcagcatcatcggcaat
gtcccgcgcggcggcgtcacagatgatgcccagccgcaactcaacggtaaggctcccgcc
cacagcaccgtaacggtcaaggccaatggtcaaatcatcggcaccaccacggcagatgcc
aacggcacctggctgctgaccccggcgactccgctggctgacggcccgcagacactgacc
gcgcaaagcaccaacacggctggcaataccagtgcaccgagcacggattacgtgattgtc
atcgacaccatcgcacccgaaaccccttcactgcagaaggtgctagatgacgtcggacct
ctccaggggccgatcccccaccagggcatcacggatgacaaccgtcctacgctaacgggc
aacggccaaccgggtgatcgaatcctcatcaaggacaacggccaggtcatcggcgaggtg
atcgtcgacagcaatggcagctggcaatatgttccgccgaaagcattgactgatggtcag
cacgattttgtcctgcaggcggtggacgctgccggcaacctcagcatcgagtcgaagcca
cacaccattctcgtagacacccgggcaccggaccgccccgccatagagcgcgtgttcgac
gaccaaggcagcatcaccggcccgattgcccaaggcggcaccacagacgatgcccgtccc
ctgatttccggcacagcagagcccctgtctacgctggtggtctacgacgccggccgcgaa
atcgcacggacccagacggatgccaatggacgctggtccgtagagccgaccctgcctctg
gcagacggtgaacacaggctgagcgccatcgcgatcgatcaggccggaaacgcaagcttg
ccctcggccgaccacgtgttcagcgtggataccctcgcccctgcacgtcctgtcattaca
caggtcttcgacgaccagggcgatgtcactggcccgctcaacccaggcgataccaccgac
gactcgcgaccgctgatcagcggaaccgccgaagccaacaccacactggtggtgttcgac
aacggtgtcgagatcggcagggcccgtgtcgataccaacggccaatggaccttcgaaccc
agcctgcccatgcccctgggcagccacaatctgagtgcccaatcgatcaacacggcgggc
aacaccagcctgccctccaatgcctttgcgttcaccctggcctcctccagccgcccgagc
agccccactatcgagagcgtctacgacgaccagggcagcatcatcggaaacgtcccgcgt
ggcggcgtcaccgatgacgcccgccccctgatccagggcagcgcaggcgcaggccttacg
gtcatggtgctggcaaatggcaaggtcataggcagcacagtggccggtagcgacggcaag
tggtcgttcgagcctggcaccgacctcgccgatgggctccaaaacatcacggccaaggcc
gcttcggcaacgggtaacctgagcctggacagcgctcgttatcccattcaggtcgacaca
caagcacctgcctcagccaagcagaagctgatggacgatgtgggaccggtacaaggcgaa
atcacccccggtacggtgacagatgacaatcgccccaccttcatcggcactgccgagcct
ggcagcaccatcatcatctacgactggggaatggaaatcgggcgcaccacggctgccggg
aatggagcctggacatttacaccggccgacgcgctgaccgatggcctgcactctttcagc
acccaggtccaggacatcgccggcaaccgtagcgatgaaagtgcgccgctcgatttccag
gtggacacctatgtgccccaggctgtcgcattgatcagccaaatgaccaaggacagcggc
accgatacccaggacttccgcaccaatgacggctcggcaggccgcctcgtcagcgggagc
gtccaggggcagctcggctttggcgagcgtatccaggtctcggtggacaatggagccagt
tggcacgatgcgctggacctgggcaacggtcgctggagctacacagaccacacaccgcac
cagagcgactgggcgatccagactcgcgtgatcgatgacgcgggtcgcaccgggccagta
gagatcaagaacgtcgtacttgaccaatgggtcaccccaccaaccgacgtgtcatgggcc
aacggtgtgttgacggtcagcttcaacgggggtgacttccgagtgggctcgctgatcgag
gccaccgtggatggcaccgccatcagtcatcgcctgtctgcccaggaaatcgccaatggt
cgcgccaacctcagcgcccccaacgcaggaacacctcctgcagtctacggggcctcgatg
gtcgatgaggtgggcaacctttcgcagcagctcaccgtcagcagcgctctgggcctcgag
cagagcttcaacgcagcagggcactatctgccactgttcaaggacttcagctacgacgtc
ggtaccatggtcatcaccggggagcgctacgaccgcaatgtcctgcaaggcatctttggc
ccgaactaccggaaccccacgctgctgcccatcagcaaacccgtgctgatggtgtccgac
atcgtgacgctggacctgaaggtcggctccgccagccggcttcagtgcaacatcagtgaa
aatcacttcatgagctccctgccgcctggcgagtacgacacgacccgtttctacggaacc
ttcagcctgaacttctacaacgaacaaggcacgatggttcacagccactctgtacagttc
aatgggcgccagttcggggagagtcttgatatccgcatgcttgaaggcgtgaccttctca
aaggtctcgctacaggtttcgagccagtacgccatcaatcaatccttcatcacactggat
gacatacgtttcgaagtcacctcaggtgactacactcggctctacgagcagaacttcgac
aacaccagccacgcgaacctgaacagcaccaacaaggccatcgatctaggtggcttcgtc
atccgcgacgaaggcctgaggaccactgcccagcaagggattttcaacgggacctggatc
gagaacagctactacaagctgagtacaccggtcaccggctccgccctgttcatcactgaa
aaggtggcgctcgaactcaagagtacgactgccaaccgctttactgccaagctgggcgac
ctgctcggcgagtcggtcaacctgaccttctatgacgcatcaggtaaagccgtacacttc
ctcaacctacgcaatgacaagctggacaacacgttgcacaacattgacgtgcgcctgccc
aacggacagaccttcacccaggtaaaggtgcaggtattcaacgatccgggcattgacggc
aaagcaccgctgatatggctcgacgagctgaaattccacggtgtgtccggtgagattggt
ggtacgcccagcggcagcaacaccatagaactgcttccccctccatccgaacaatcggtc
cagacagcacacccctactacggtggtgacagcaacaacaccttccttctggcagacata
cggatactcaacggacccggcgcctcaatcaatggcggtgaaggcatggattgcatcacc
ctgactggcgcgggtcaggtcatggacctcaccgcgctggccggaaaggtccgctccatc
gaagtgctggacatcaccggcagcggcaacaacacccttaaactctcggcggcagatgta
ctcagccagggccagactgacctgttccacaacagcggccacgtccagatgctggtcaag
ggtgatgcaggcgacctggtccaattacagaagcaggcaggggccaacgacggggggcgc
tggcagtcgcagggcaatgtcaacgtcgatggcgtgggctaccaagtctggcagcacagc
tccctggaggctgagctccttgtccagatgggcgtgaccacacaattggtataa
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integrated database retrieval system
