Pseudarthrobacter oxydans: SMD14_00035
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Entry
SMD14_00035 CDS
T09608
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pok03032
]
SMD14_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_00035 (gyrA)
Enzymes [BR:
pok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SMD14_00035 (gyrA)
DNA replication proteins [BR:
pok03032
]
Prokaryotic type
DNA Topoisomerases
SMD14_00035 (gyrA)
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMD14_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
VPS11_N
DUF7737
Motif
Other DBs
NCBI-ProteinID:
WPU09438
LinkDB
All DBs
Position
8405..11083
Genome browser
AA seq
892 aa
AA seq
DB search
MSDETPENPASDAGTPDTVLEGDVLIDRVEQVDLQTEMQRSYLDYAMAVIVGRALPDVRD
GLKPVHRRVLYAMFDGGYRPDRSFNKCARVVGEVMGQYHPHGDTAIYDALVRLIQDWTMR
YPLALGQGNFGSPGNDGAAAPRYTETKMAPLAMEMVRDIDEETVDFQDNYDGKNQEPTIL
PARFPNLLVNGSSGIAVGMATNIPPHNLREVADGVQWYLANPGASREELLEELLLRIKGP
DFPTGATILGHKGIEDAYRTGRGSVTMRAVVNVEELQGRTCLVVTELPYQANPDNLAIKI
AELVKDGKIQGIADLRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTELQSNFSANMLA
IVDGVPRTLSLDAFIRHWVTHQMDVIARRTRYRLRKAEEEAHILRALLKALDMLDEVIAL
IRASNTTEAARDGLMELLDIDELQARAILDMQLRRLAALERQKIQDRHAELEALIAEYNE
ILGSEQRQREIISTELGEIVDKHGDDRRTRILMGFDGDMSMEDLIPEEEMVVTITRGGYV
KRTRSDNYRSQQRGGKGIKGAQLRGDDVVEHFFVTTTHHWLLFFTNLGRVYRAKAYELME
AGRDAKGQHVANLMAFQPDEHIAQVLDLKDYQQAPYLVLATKRGLVKKTRLEDYDTNRSA
GVIAINLRDGDELVSAQLVSETDDLLLVSRKGQSIRFTATEDALRPMGRATSGVTGMKFR
EEDELLAANVVTDGSYVFIVTEGGYAKRTAVEEYRLQGRGGLGIKVAKLAEERGDLVGAL
IVQEEDEVLVVMEGGKVVRSSVAGVPAKGRDTMGVIFAKPDKNDRIIEVARNSERGLEGE
ESPEDDVTLAEDGGSLEESASPALAEEPLAVESEDASGNAEQNEDYTEVTSE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaaacacccgagaacccggcctccgacgccggcactccggacaccgttctt
gaaggcgacgtgctgatcgaccgcgtggagcaggtggacctccagacagaaatgcagcgg
tcctacctggactacgccatggctgtcattgttggccgtgccctcccggacgtccgggac
ggcctgaagccggtccaccgccgggtcctttacgcgatgttcgacggcggctaccggcct
gaccgttccttcaacaagtgtgcccgtgtggtgggcgaggtcatgggccagtaccacccg
cacggcgatacggcgatctacgacgctttggtccgcctcatccaggactggaccatgcgc
taccccctggccctcggccagggcaacttcggctccccgggcaatgatggcgctgcggca
ccccggtacactgaaacgaagatggccccgcttgccatggaaatggtcagggacatcgac
gaggaaaccgtcgatttccaggacaactacgacggcaagaaccaggaacccacgatcctg
cctgcaaggttccccaacctgctggtgaacgggtcctccggcatcgccgtcggcatggcc
accaacattccgccgcacaacctgcgcgaagtggcggacggcgtgcagtggtacctggcc
aaccccggcgccagccgcgaagaactgctggaagaactcctgctgcggatcaagggtccc
gatttccccaccggcgccaccatcctgggccacaagggcatcgaggatgcctaccggacc
ggccgcggctccgtcaccatgcgcgcggtggtaaatgtcgaagagctgcagggacgcacc
tgcctggtggtcaccgagctgccgtaccaggcaaacccggacaacctggccatcaagatc
gccgaactggtcaaggacggcaagatccagggcattgcggacctccgcgacgagacctcc
ggacgcacgggccagcgcctggtcatcgtgctcaagcgcgatgccgtggccaaggtggtg
ctgaacaacctttacaagcacaccgaactgcaaagcaacttctccgccaacatgctggcc
attgttgacggcgtcccccgcaccctgagcctggacgccttcatccggcactgggtgacc
caccagatggatgtcattgcccgccgcacacggtaccggctgcgcaaggccgaggaagag
gcccacatcctgcgggcgctcctgaaggcactggacatgctggacgaggtgatcgccctc
atccgcgcgtccaacaccaccgaagcggcacgcgacggactgatggaactgctcgacatc
gacgagctccaggcccgcgccatccttgacatgcagctgcgccgcctcgccgccctggaa
cggcaaaagatccaggaccggcacgccgagcttgaagccttgatcgccgagtacaacgaa
atccttggctcggagcagcgccagcgcgagatcatcagcaccgagctcggcgagatcgtg
gacaagcacggtgacgatcgccgtacccggatcctcatgggattcgacggcgacatgtcc
atggaagacctcattcccgaagaggagatggtggtcaccattacgcgcggcggctacgtc
aagcgcacccgcagcgacaactaccgttcgcagcagcgtggcggcaagggcatcaagggt
gcccagctccgcggcgacgacgtagtggagcacttcttcgttaccaccacccaccactgg
ctgctcttcttcaccaacctgggccgcgtctaccgcgccaaggcctatgagctgatggag
gcgggccgcgatgccaagggccagcacgtggccaacctcatggcgttccagccggacgaa
cacatcgcccaggtcctggacctgaaggactaccagcaggcgccgtacctggtcctggcc
accaagcgagggctggtcaagaagacccggctcgaggattacgacaccaaccgttccgcc
ggcgtgattgccatcaacctgcgcgacggcgacgagctggtgtccgcgcagctggtttcg
gaaaccgacgacctcctgctggtgtcccgcaagggccagtccatccgtttcaccgccacc
gaggatgccctccggcccatgggccgggcaacctccggagtcaccggaatgaagttccgc
gaggaggatgagctgctggccgccaatgtggtgactgacggctcctacgtgttcatcgtg
accgagggcgggtacgccaaacggacagcggtggaggaataccggctccagggacgcggc
gggctgggcatcaaggtagccaagcttgccgaagaacgcggcgacctcgtgggcgcgctg
atcgtccaggaagaggatgaggtgctggtggtcatggagggcggcaaagtggtccggtcc
tccgttgccggcgtccccgccaagggtcgtgacaccatgggcgtgatctttgccaagccg
gacaaaaacgaccggattatcgaggtggcacgcaacagcgaacgcggcctcgagggcgag
gaatcaccggaggatgacgtaacgttggctgaagacggcggatccctcgaggaatcagcc
agcccagcattggcagaagaaccactggccgttgagtcagaggacgcctcgggcaacgct
gagcagaacgaagactacacggaggtaacgagtgagtaa
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