Pseudarthrobacter oxydans: SMD14_01355
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Entry
SMD14_01355 CDS
T09608
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SMD14_01355 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pok01007
]
SMD14_01355 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pok03016
]
SMD14_01355 (serS)
Enzymes [BR:
pok01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SMD14_01355 (serS)
Amino acid related enzymes [BR:
pok01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SMD14_01355 (serS)
Transfer RNA biogenesis [BR:
pok03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SMD14_01355 (serS)
Prokaryotic type
SMD14_01355 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
WPU09690
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All DBs
Position
309937..311217
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AA seq
426 aa
AA seq
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MIDVKDLSENPDKYRASQRARRADESVVDAIISADSARRAALIRFENLRAEQNAFGKKVA
QTKGDEKKALLAEVKELANSVKAASAEADAAQTKQEELLRTIPNLVEDGVPEGGEDDYVV
VKTVGTPREFPDFEPKDHLEIGELIGAIDMERGAKVSGARFYFLRGVGARLEMALLQMAM
DQAIEAGFVPMITPTLVRPETMQGTGFDVKHDAEIYRLAEDDLYLVGTSEVALAGYHADE
ILDFAAGPIRYAGQSSCYRREAGSHGKDTRGIIRVHQFNKVEMFIYTTVEEAAAEHQRLL
AWEEEMLAKCELPYRVIDTAAGDLGMSAARKYDCEAWVPTQGAYRELTSTSNCTTFQARR
LNIRERAVNAEGVAKGTRAVATLNGTLATTRWIVALLEHHQNADGSVNVPKALQKYLGGL
EVLPVL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgtaaaagacctcagcgaaaacccggataaataccgtgcaagccagcgtgcc
cgccgtgcggatgaatcagtggtggacgcgatcatctctgcggattccgcccgccgcgcg
gcgctgatccgcttcgagaacctccgtgccgagcagaacgctttcggcaagaaggtggca
cagaccaagggcgacgaaaagaaggcgctgctggccgaggtcaaggagctggccaactcg
gtcaaggccgcctccgccgaggccgatgccgcccagacgaagcaggaagaactgctgcgc
accatccccaacctggttgaggacggcgttcccgagggcggcgaggatgactacgtggtg
gtcaagaccgtcggcacgccccgcgaattcccggacttcgagccgaaggaccacctggaa
atcggcgagcttatcggcgcgatcgacatggagcgcggcgccaaggtttccggcgcccgc
ttctacttcctgcgcggggtgggtgcccggctggagatggcgctgctgcagatggccatg
gaccaggccatcgaggccggtttcgtccccatgatcacgcccaccctggtgcgcccggag
accatgcagggcaccggctttgacgtaaagcacgacgccgagatctaccgtctcgccgaa
gacgacctctacctggtgggcacctccgaggttgccctcgccgggtaccacgcggacgaa
atcctggactttgccgccggccccatccgctacgccggccagagctcctgctaccgccgc
gaagccgggtcgcacggcaaggacacccgcggcatcatccgcgtccaccagttcaacaag
gtggagatgttcatctacaccaccgttgaagaggccgccgccgagcaccagcggctgctg
gcgtgggaagaggagatgctggccaagtgcgagctgccgtaccgggtgattgacaccgcg
gccggcgacctcggcatgtccgccgcccggaagtacgactgcgaagcgtgggttcccacc
cagggcgcctaccgcgagctgacctccacctccaactgcaccaccttccaggcccgccgg
ctgaacatccgcgaacgcgcggtgaacgccgagggcgtcgcgaagggcacccgggccgta
gccaccttgaatggaaccctggccaccacccgctggatcgtggcgctgctggagcaccac
cagaacgcggacggctcggtcaacgtgcccaaggccctgcagaagtacctgggcggcctc
gaggtcctcccggtcctctag
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