Pseudarthrobacter oxydans: SMD14_02950
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Entry
SMD14_02950 CDS
T09608
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03030
DNA replication
pok03430
Mismatch repair
pok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMD14_02950
03430 Mismatch repair
SMD14_02950
03440 Homologous recombination
SMD14_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pok03032
]
SMD14_02950
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_02950
Enzymes [BR:
pok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMD14_02950
DNA replication proteins [BR:
pok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMD14_02950
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMD14_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
DnaX_C
Rad17
AAA_14
AAA_19
AAA_5
Mg_chelatase
nSTAND3
AAA_28
TsaE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WPU09991
LinkDB
All DBs
Position
complement(626816..630166)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSARIGRVFSVTVTTALYRRYRPDSFADVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGC
GKTTSARILARCLNCAQGPTDTPCGTCPSCVELARGGSGSLDVIEIDAASHGGVDDARDL
RERATYAPVRDRYKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTEPDKVIGTIR
SRTHHYPFRLVPPEPLMAYLELLCSQENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAG
AGPNGLDYELAVALLGYTHASLLDDVVEAVAASDSATVFRAVDRVIQTGHDPRRFVEDLL
ERFRDLIIVQAMPESAQTILRGMPADQIARLKNQAHNLGAAELSRAADVTNTALTEMTGA
TSPRLHLELLCARILLPSSEQNERGMAARIDRVERRLNYAGNDVGAPAGSIADGSTPAAA
PAAPPASNAPAPETRPSAPESSTGAAGANGPARDAAKAAPAAPAVAGPAPSAPAPPAAAG
AGSVGEASPAVGGPRSPLTAPRVSTSDWPVEDSAGNLPSPASSDRPAGRDPGFASPQPQV
GPDAASGPAQGAMQTPGSGPAQASGKTPASEPKESPSTGQAETSSAPPAPAAAPGPMGDV
EVLRRAWPDVLQTLSKIKRSTWALVEPNAQVAAFDGHSLTLAFTTSGLAGAFGRADHSEN
LRQAIHKTVGIDCQITASAGGGTQASSDPNPKVPASRVAATTSADVAWGLAPASAPTGSD
AARQPGPPGGPVSASPQQSVPDAKHQQKARPGQGPADPGQADGVAPEGVAPQAAAAALSA
PLPGSGAVRPASGQPAAQVAAGEGSAPVSVPRAAVEEDYSYSDDDWGPARDEDAPPLDEE
PPLDWAPSNRSRPSGVPAASGPSGTPGTGSGVKGPSPATSGPVDVPGVQPHGPDAAASTA
APPHDPWTRAVEQAPGIWVVGEESNVGRAASPAAPDEAPTGPVATPRYEPATAQVPPSIP
VTRAGASPEPDWGLAPSSPSPGAGRFGTDEPGGGSSSPDTARAPEYAMASASPAPAAAPT
QAVPAKAPQPSSAAAAQARQSLYQRLSNSPEAEAGRAKAPARAVAAAATYVQDIPSADDE
TIEESGVFGRAAVERILGGKLIEERSPDGSPITPRY
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccggattggtagggttttctctgtgacagttactaccgccctctaccgcaga
taccgtccggattcgtttgctgacgttatcgggcaggagcatgtcaccgagccgctgatg
acggctttgaggaaaaaccgggtcaaccacgcctacctcttctccggccccaggggctgc
ggcaagaccacctcggcccggatcctggcgcgctgcctcaattgcgcccagggccccact
gacaccccctgcggcacgtgccccagctgcgttgagctggcccgcggcggctccggttcg
ctggatgtcatagagattgacgccgccagccacggcggcgtcgacgatgcccgggacctc
cgtgagcgggccacctatgcacctgtacgggaccgctacaagatcttcatcattgacgag
gcccacatggtcacgtccgcaggcttcaacgctctgctgaagatcgtggaagaaccaccc
gaacacatcaagttcatcttcgccaccacggaaccggacaaggtcatcggcaccatccgc
tcccgcacccaccactacccgttccggctggtgccgccggaaccgctgatggcctacttg
gagctcctgtgcagccaggagaacgtcccggtggcccccggcgtcctgtccctggtgatc
cgtgccggcggcggctccgtccgtgattcgctctccgtcctggaccagctgatggcgggc
gccgggccgaacggcctggactacgaacttgccgtggcgctgctcggatacacccacgct
tcactgctcgacgacgtggtcgaggccgttgccgcttctgattccgctaccgttttccgt
gccgtggaccgggtgatccaaaccggccatgatccccgccgcttcgttgaggacctgttg
gagcggttccgcgacctcatcatcgtccaggcgatgcctgaaagcgcccagaccattctc
cgcggcatgcccgcggaccagattgcccgcctgaagaaccaggcccacaacctgggggcg
gccgagctgtctcgcgccgcggacgtcaccaacaccgcgttgaccgagatgaccggcgcc
acctccccgcggctgcaccttgagctgctgtgcgcccggatccttttgcccagctcggag
caaaacgagcgcggcatggccgcccggatagaccgcgtggagcgcaggctgaactacgcc
gggaacgacgtcggtgctcccgcagggtcaattgcggacggctccacaccggccgccgcc
cctgccgctcccccggcgtccaatgcccctgccccggaaacaaggccctctgctcctgaa
tcttcaactggcgccgccggtgccaatggtccggctcgggatgccgcgaaagcggcgccc
gcagctccggccgttgcgggcccggcgcccagcgccccggccccgccggcagctgccgga
gcgggctccgtcggggaggcttcccctgcggtcggcggaccacgctctcccttgaccgcc
ccgcgggtcagcaccagcgactggccggtagaagattcggccgggaacctcccgtcgccc
gcctcttcggatcgtccagccggacgcgacccgggctttgcctcgccgcagccccaggtg
gggccggacgctgcgtccggcccggcgcaaggtgccatgcagactccgggttccggcccg
gcgcaggcttccggcaagacgcccgcctccgagcccaaagaatccccgtctaccggccag
gcggagacgtcgtccgcgccgccggcgcccgctgctgcgcccggacccatgggggacgtg
gaggtcttgcgccgcgcctggcccgacgtcctgcagaccctgtccaaaatcaagcgcagc
acctgggcgctcgttgaacccaatgcccaggttgctgccttcgacggccacagcctcacc
cttgcattcaccacgtccggacttgccggagccttcggccgggcggaccattcggagaat
ctgcgccaggccatccacaagaccgtaggcatcgactgccaaatcactgcgtcggccggt
ggcggcacgcaggcgagctctgacccaaacccaaaagtgcccgccagccgggtggcggcg
acaacttcggctgacgtcgcttgggggctggcaccggcttctgccccgacgggcagcgat
gccgcacggcagccgggccccccaggcgggcccgtttccgcgagcccgcagcagtctgtg
ccggacgcaaaacaccagcaaaaggcacgtcctgggcaggggccggctgatccgggccag
gccgacggcgttgcgccggaaggcgtggcgccccaggcagcagccgcggcactttcggcc
ccgcttcccggaagcggcgccgtgcggcccgcatccggacaacccgctgcgcaggtcgcg
gccggcgaaggctccgccccggtttcggtgccccgcgccgccgtggaggaagactattca
tattccgacgacgactggggtccggccagggacgaggacgctccgcctctggacgaagaa
cctcccctggactgggccccgtccaaccggtcccggccctcgggagtgccggccgcttca
ggcccgtcgggcacccccggcaccggttccggtgtaaaggggccgtcgccggccacctcc
ggccccgttgacgtcccgggcgtccagcctcacgggcctgatgctgccgccagcacggct
gcaccaccgcatgatccttggacccgcgccgtggaacaggctcccgggatctgggtggtc
ggcgaagaaagcaacgtgggcagggcagcctccccggcggcgccggacgaggcaccaacc
gggccggttgccacaccgcgctacgagcccgccaccgcccaggtgccaccctcaatcccc
gtcacgagggccggcgccagcccggagccggactggggcctggctccgtcttcaccatct
ccaggcgccggacggtttggaacggacgaaccgggcgggggcagttcctcaccggacacc
gcgcgggcgccggagtacgccatggcgtcagcttccccggctcccgcagccgctccaacc
caggctgtcccggccaaggctcctcagccgtcctcggctgccgcagcccaggcacggcaa
agcctttaccagcgactttccaacagccctgaagcggaagccggccgcgccaaggccccg
gcccgtgccgtggcagctgctgccacctatgtccaggacatcccgagcgcagatgatgag
acgatcgaagagtccggcgtgttcggacgtgccgcggtggagcgtattctgggcgggaag
ctgattgaggagcgctcccccgacggaagtcccatcacgccgcgatattga
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