Pseudarthrobacter oxydans: SMD14_03790
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Entry
SMD14_03790 CDS
T09608
Name
(GenBank) ribonuclease domain-containing protein
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pok03019
]
SMD14_03790
03016 Transfer RNA biogenesis [BR:
pok03016
]
SMD14_03790
Enzymes [BR:
pok01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
SMD14_03790
Messenger RNA biogenesis [BR:
pok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMD14_03790
Transfer RNA biogenesis [BR:
pok03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SMD14_03790
Prokaryotic type
SMD14_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
WPU10139
LinkDB
All DBs
Position
806898..807368
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AA seq
156 aa
AA seq
DB search
MRNRSVLPLLLAGLMVLAFLAFGGTGFLGQLTETTTPEGTSSAMPAPGAGPGTSAPGQDN
PSGLPEVRESALPVEGRRVLELIRAGGPYRYSQDGQAFGNFERLLPRRDRGYYREYTVPT
PGESDRGARRIVAGADGEKYYTDDHYESFRYIAEGS
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaccgttccgtcctgcccctgttgctggcgggcctgatggtgcttgctttcctg
gccttcggcggcacgggcttcctcggccagctgacggaaactacgacgccggagggcacc
tccagtgccatgcctgcgcccggcgccgggcccgggaccagcgcccctggacaggataac
ccttcggggctgccggaggttcgtgagtccgcgctcccggtggagggccgcagggttctc
gaactcatccgcgcgggcggaccgtaccgctacagccaggacggccaggccttcggtaac
ttcgagcgcctcctgccacggcgggacaggggctattaccgcgagtacacagtgccaacg
cccggggaatcggacaggggagcgcgccgcatcgtggccggcgccgacggcgagaagtac
tacacggacgatcactacgagtcattcagatacatagcggaaggcagctga
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