Pseudarthrobacter oxydans: SMD14_03990
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Entry
SMD14_03990 CDS
T09608
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD14_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_03990
Enzymes [BR:
pok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SMD14_03990
DNA repair and recombination proteins [BR:
pok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SMD14_03990
Prokaryotic type
SMD14_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WPU10174
LinkDB
All DBs
Position
complement(861886..862656)
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AA seq
256 aa
AA seq
DB search
MFESDALFELAQDPARGQGFAELAQLPLKELMAPDWADALAGVESGLRGVLAFLADEEAA
GHTVLPAPSNVLRAFRQPLAEVKVLMVGQDPYPTPGHAVGLAFSVDPHVRPIPRSLANIY
RELEADLGIPARVHGDLSAWTGQGVLLLNRVMTVRAGAAGSHRRKGWEEITTAAVQAVAG
RRAPDGSRLPLVAVLWGKDAESVRPLLPGVPAVSSAHPSPLSASRGFFGSRPFSRVNELL
REQGAPGVTWELPPVA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaatcagatgcccttttcgaactggcgcaggatccggcgcgcgggcagggtttc
gccgaactggcgcagctgccgctgaaggagctgatggcgcctgactgggcagacgccttg
gcgggcgtggaaagcggactccgcggcgtgctcgctttccttgccgacgaagaggcggcc
gggcacacggtgctgccggcgccgtcgaacgtcctgcgggctttccgccagcccctcgcg
gaggtgaaagtcctgatggtggggcaggatccgtaccccacgccggggcatgccgtcggc
ctggccttctccgttgatccgcacgtccggcccatcccgcggagcctggcgaacatctac
cgggagctggaggcggatctgggaattcccgcgagggtccacggcgacctttccgcctgg
accgggcagggtgtgctgctgctgaaccgcgtgatgactgtaagggccggagccgcaggg
tcgcaccgcaggaaaggttgggaggagattacgacggcggccgtccaggccgtggccggg
cggcgggctccggacgggtcacgcctgccgctggttgccgtgctgtggggaaaggacgcg
gagagcgtgcgtccgctgttgccgggggttccggccgtgtccagcgcgcatcccagcccc
ctgtccgcgtcccgcggcttcttcggttcgcggccgttcagccgcgtcaacgagctgctg
cgggagcagggtgccccgggcgtaacctgggagcttccgccggtagcctag
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