Pseudarthrobacter oxydans: SMD14_04015
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Entry
SMD14_04015 CDS
T09608
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMD14_04015 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pok03019
]
SMD14_04015 (groL)
03110 Chaperones and folding catalysts [BR:
pok03110
]
SMD14_04015 (groL)
03029 Mitochondrial biogenesis [BR:
pok03029
]
SMD14_04015 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pok04147
]
SMD14_04015 (groL)
Enzymes [BR:
pok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SMD14_04015 (groL)
Messenger RNA biogenesis [BR:
pok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SMD14_04015 (groL)
Chaperones and folding catalysts [BR:
pok03110
]
Heat shock proteins
HSP60 / Chaperonin
SMD14_04015 (groL)
Mitochondrial biogenesis [BR:
pok03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SMD14_04015 (groL)
Exosome [BR:
pok04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SMD14_04015 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SMD14_04015 (groL)
Exosomal proteins of breast cancer cells
SMD14_04015 (groL)
Exosomal proteins of colorectal cancer cells
SMD14_04015 (groL)
Exosomal proteins of bladder cancer cells
SMD14_04015 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
WPU10178
LinkDB
All DBs
Position
865787..867415
Genome browser
AA seq
542 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIE
KAVEAVTRELLASAKEIETKEEIAATASISAGDEEIGALIAEALDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFVTDAERQETVLEDPYILIVNSKISNVKELVAVLEKVMQ
SNKPLLIIAEDIEGEALATLIVNKIRGTFKSVAVKAPGFGDRRKAQLADIAVLTGGQVIS
EEVGLKLENAGLELLGKARKVVVTKDETTIVEGAGDADQIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAKAFANLQLSGDEATGANIVRVAIDAPLKQIAFNAGLEPGVVVDKVRGLPAGHGLNAAT
GEYVDLLAAGVNDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKNPAPMGGGDDMGGMG
GF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcattgcatttgatgaagaggcacgccgcggccttgagcggggcctgaac
atcctcgccgacgccgttaaggtcaccctcggcccgcgtggacgcaacgtcgtcctcgaa
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctggacgatccctacgagaagatcggcgccgagctggtcaaggaagttgccaagaagact
gacgacgtcgccggcgacggaaccaccaccgccaccgttctggcccaggccctggtcaag
gaaggcctgcgcaacgttgccgccggtgccgacccgctgtccctcaagcgcggcatcgaa
aaggctgtcgaagccgtcacccgcgagctcctggcttccgccaaggaaatcgaaaccaag
gaagagattgccgctacggcatccatctccgcaggggacgaggaaatcggtgcgctgatc
gccgaagccctggacaaggtgggcaaggaaggcgtcatcacggtcgaggaatccaacacc
ttcggcctggaactcgagctcaccgaaggcatgcgcttcgacaagggctacatctccgcc
tacttcgtcaccgacgcggagcgccaggaaacggtcctcgaagacccgtacatcctgatc
gtcaactccaagatctccaacgtcaaggaactggttgctgtcctcgaaaaggtcatgcag
tccaacaagccgctgctgatcatcgccgaggacatcgagggcgaggccctggccaccctg
atcgtcaacaagatccgcggcaccttcaagtccgttgccgtcaaggctccgggcttcggt
gaccgccgcaaggcacagctcgccgacattgccgtcctcaccggcggccaggtcatctcc
gaggaagtcggactcaagctggaaaacgccggcctggaactcctgggcaaggcacgcaag
gttgtggtcaccaaggacgagaccaccatcgttgaaggtgccggcgacgccgaccagatc
gccggccgcgtgtcccagatccgcgccgagatcgagaactccgattcggactacgaccgc
gagaagctgcaggaacgcctggccaagctggccggcggcgttgcagtgatcaaggccggt
gccgcaaccgaggttgagctcaaggagcgcaagcaccgcatcgaagacgcagtgcgcaac
gccaaggccgctgttgaagaaggcatcgttgccggtggcggcgtggccctcatccaggcc
ggtgccaaggcattcgccaacctgcagctgtccggcgacgaggccaccggtgccaacatt
gtccgcgttgccatcgatgctccgctgaagcagatcgccttcaacgccggcctggagccg
ggcgttgtggttgacaaggttcgcggcctgcccgcaggacacggcctgaacgccgcaacc
ggtgagtacgtcgacctgctggctgccggcgtgaacgaccccgtcaaggtaacccgctct
gccctgcagaacgcggcttccattgccggcctgttcctcactaccgaagctgttgttgcc
gacaagccggagaagaacccggcccccatgggcggcggcgacgacatgggcggcatgggc
ggcttctaa
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