Pseudarthrobacter oxydans: SMD14_04180
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Entry
SMD14_04180 CDS
T09608
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03420
Nucleotide excision repair
pok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMD14_04180 (pcrA)
03430 Mismatch repair
SMD14_04180 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_04180 (pcrA)
Enzymes [BR:
pok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMD14_04180 (pcrA)
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMD14_04180 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SMD14_04180 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WPU10209
LinkDB
All DBs
Position
902098..904641
Genome browser
AA seq
847 aa
AA seq
DB search
MDMLFDPYSDGPFKAASAAASRTKSRPDGATAAGPGGSAPWENRPGAGLAGSNHEPDAQH
GEGHRHGNRRPDAAQLLEGLNPQQEEAVKHVGPALLIVAGAGSGKTRVLSNRIAYLIATG
RAHHGEILAITFTNKAAAEMRERIEKLVGGRAKIMWISTFHSSCVRILRQEAANVGLKSN
FSIYDSADSLRLVTQVSKALDLDPKKFAPKAIQHKISALKNELIDADSYASAANYNDPFE
QAVADVFKGYTQRLRQANAMDFDDLIAETVYMFRAFPALAESYRRRFRHVLVDEYQDTNH
AQYALVREIVGEGPGASELTVVGDSDQSIYAFRGADIRNIVEFEKDYPEARTIKLEQNYR
STQNILSAANSVISRNPNRPEKRLWTAEGDGHKIIGYVGENEHDEAQFIAKEIDRLQDED
NLRPGDVAIFYRTNAQSRSIEDVLVRVGLPYKVVGGTRFYERKEIKDALAYLRVLVNPDD
DVNLRRVLNEPKRGIGDRAEGAVAALAQRERTSFMDAARRADQAPGMATRSVNAVLGFVK
LLDDLAEVAAGSGAAAALEAVLEQTGYLAALRSSTDPQDESRVENLAELVAVVREYEQEN
PEGSLGAFLEQVSLVADADQIPDAPGADIDAAVAEAKRLGVVTLMTLHTAKGLEFPVVFL
TGMEHGLFPHQRSATDPKELAEERRLAYVGLTRARKRLYVTRSEVRSMWGQSQYNPASQF
LEEIPAELLEWKREGTSRQGGWGSSGSIGSNRYSGSFWGAGTARGASADASAGFNADVPA
AIARNRVQPQKEIVAVSVGDKVNHTSFGNGTVLALEGAGDKTVAKVKFDVGEKRLLLRYA
PLTKLDA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgtttgacccgtactctgacggaccgttcaaggccgcttccgcagcggct
tcccgcaccaagtcgcgacctgacggcgctacggcggctggtcctggcggttctgcgccc
tgggagaaccggccaggtgcgggccttgcgggcagcaaccacgagcctgatgctcagcac
ggggaggggcatcgccacggcaatcgcaggccggacgcagcccagctcctggaggggttg
aacccgcagcaggaagaagcggtcaaacacgtcgggcccgccctgctgatcgtggccggc
gccggttcgggcaagacccgtgtgcttagcaacaggatcgcctacctgatcgccaccgga
cgtgcccaccacggcgaaatcctggccatcaccttcacgaacaaggccgcggcggaaatg
cgggaacgcatcgaaaagctcgtgggcggacgtgccaagatcatgtggatttccacgttc
cattcatcctgcgtccgcatccttcggcaggaggcggcaaatgtcggcctgaagtcgaac
ttctccatctacgactccgcggactcgctccggctcgtcacccaagtatccaaagccctg
gacctggatcccaagaagttcgcacccaaggccatccagcacaagatttccgccttgaag
aacgaactcatcgatgctgactcgtacgcctctgccgcgaactacaacgatcctttcgag
caggccgtagccgatgtcttcaagggctatacccagcggctgcgccaggcgaatgccatg
gactttgacgacctcatcgcggagaccgtctacatgttccgggctttccccgcgcttgct
gagtcctaccggcgccggttcaggcatgtgcttgtggacgaataccaggacaccaaccat
gcccagtacgcgctggtccgggaaatcgtgggggaaggtccgggtgcgtcagagctgacg
gtcgtgggtgattccgatcagtccatctacgcattccgcggcgccgacatccgcaacatc
gtcgagttcgaaaaggactatcccgaggcccggaccatcaagctggagcagaattaccgt
tccacccagaacattctcagcgcagcgaactccgtcatctcaaggaacccgaaccgtccc
gagaagcggctgtggacggcggagggggacggccacaaaatcatcggttatgtgggcgag
aacgagcacgacgaagcccagttcattgccaaggagattgaccggctccaggacgaagac
aacctccgtcccggcgatgtcgctattttctaccgcaccaatgcccagtcccgctccatc
gaagacgtcctggtccgcgtgggcctgccctacaaggtggtgggcggcacgcgcttctac
gagcgcaaggagatcaaggacgccctcgcctacctgcgcgtcctggtcaacccggacgac
gacgtcaacctccgccgggtgcttaacgagccgaaaaggggcatcggagaccgggccgaa
ggcgccgtagcggcactggcccagcgcgagcggacctcctttatggacgctgcacgccgt
gctgaccaggctccgggaatggcaacccggtccgtgaacgccgtcctcggttttgtgaag
ctgctggatgacctcgccgaggtggctgccggttcaggcgccgcggcggcattggaggca
gtcctggagcagaccggctaccttgccgcgctgcgctccagcactgacccgcaggacgag
tcgcgggtggaaaacctggcggaactcgtcgccgtcgtccgtgagtatgagcaggagaac
ccggaagggtcgctgggcgccttcctggaacaggtctcgctggtggcagacgcagaccag
atccctgacgcgccgggagcagacattgatgccgccgtggcggaagccaaacggctgggc
gtagtcacgctgatgacactgcacaccgcgaagggcctcgagttcccggtggtgttcctg
accggcatggaacacggactgtttccgcatcagcgctcggccacggaccccaaggaactg
gccgaggaacgccggcttgcctatgtgggcctaacccgcgcgcggaaacggctctatgtc
acccgctccgaggtccgcagcatgtgggggcagagccagtacaacccggccagccagttc
ctcgaggagattcccgccgaactcctggagtggaagcgcgaggggaccagcaggcagggc
ggctgggggagcagcggttccatcggctccaaccgctacagcgggtccttctggggcgcg
ggaaccgcgcgcggtgcgtcggctgatgcctcggccggcttcaatgcggatgttcccgcc
gccatcgcgcggaaccgcgttcagccgcaaaaggaaattgtggcggtcagcgttggggac
aaggtcaaccacaccagcttcggcaacggaacagtcctggcgcttgagggagcgggggac
aagacagtggccaaggtgaagttcgacgtcggcgagaagcggctgctgctgcgctacgcc
ccgctgacaaagctcgatgcctga
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