Pseudarthrobacter oxydans: SMD14_04540
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Entry
SMD14_04540 CDS
T09608
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
pok
Pseudarthrobacter oxydans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
RNase_H_2
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
nSTAND3
ResIII
GIL1_IRKI_C
SLFN-g3_helicase
NPHP3_N
MobB
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WPU10276
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Position
complement(982524..986174)
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AA seq
1216 aa
AA seq
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MFLLEAAAAGAPPDLVFSASDLVAASECEYRTLRVLDEKLGRSPKAVFPADEMQVRAGEL
GDRHEQTVLASLLAKYGEWDAGRGAGVYSLDRGRNGRGELQAKHAETELALRSGADVVFQ
ATFFDGEFLGYADFLVNEAAGTGNPGRYEVWDTKLARHAKVGALLQLAAYGDQLLGMGIE
PSPVVTLVLGTRIGEDWLRSSHSLPDLLPVFRERRRRFRELVAHHREAGATVRWQQPGIV
HCGRCDYCAEQVQLHRDLLMVAGMSVVQRKKLHAAGIITIDELAAMPAGDARNSVARLRS
QARMQLGLDAVAGSRTFTKDGQPHTVAFTVLPGNTIGSLPPPSPGDIFFDFEGDPLWQDP
ATGAWGIEYLFGVVEAPAPGHHGDPVFRPFWAHSRSGERRAFLAFLGYVEERRARYPDLH
VYHYAPYEKTALRNLSLAHQAGEETVDSWLREGLLVDLYATVRHSLRISEPSYSIKKLEP
LYMGNNLRSGDVTDAGASVVANAAYCAARDAGNMAEADKVLASISDYNRYDCLSTLRLRD
WLREVGAQAAAAAAPPERQGAAEGQGAAEGQGAAERRPAPEQRPVPEESPAEARLRGYLA
DLPDNRPWTDDERAIAMVAAATGYHRRERKQFWWQHFDRVEAPLENWADQRNVFVVSSAE
VTSDWALAKPRERMRTRVLRLRGTMTEGSDFRADSTWCRLYDAPPPEGMAAPDAAPGARA
YAFGTRISELAPAPDDPEHTIVTIAERESGKVAAYPHLPVALTEDQPLATASIEAAIAEI
AATVGASVPSLPAQPGLDILRKQPPRFSTLAGPVDVPHNTDGSADYAAAITASLRDLDRS
YLAVQGPPGTGKTYVGAHVIGRLVKEGWKIGVVGQSHNVVENLLCRAIAAGGVDPAAVAK
KLASPHDVPWKSGRDGDVARLLASSGGCLVGGTAWTMTGKEVPAGSLDLLVIDEAGQFSL
ANTLAVSRAAKRLLLLGDPQQLPQVTQGAHPEPVDESALGWLAAGHATLPASLGYFLADS
WRMHPELCRAVSGLSYEGKLQSAPAASQRKLEELPPGVETVFVEHTGNTTASREEAAEVV
RQARRHLGLKWTPGAQGEARPLDQQDLLVVAAYNAQVHLVRKTLEEAGLPDVRVGTVDKF
QGQEAPVVLVSMACSAVAEAPRGAEFLLNRNRINVAVSRGQWRAVIIRSPELTSYMPHKP
AALEELGAFIGLSPRD
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctgcttgaagctgctgcggccggcgcgccgccggacctggtgttttccgccagc
gaccttgtggccgccagcgagtgtgagtaccgcacgctccgggtcctggacgagaaactg
ggccgctcccccaaggcggtctttcccgcagacgaaatgcaggtccgcgccggcgaactg
ggcgaccggcacgagcaaaccgtcctggccagcctgcttgccaagtacggcgaatgggat
gccggccggggtgcgggcgtgtactcccttgatcgtggccggaacggccgcggggagctg
caggccaagcatgccgaaacagagctcgccctgcggtccggggcggacgtggtcttccag
gccacgttctttgacggcgagttcctgggctacgcggacttcctggtcaacgaagccgcg
ggcaccggaaaccccgggcgctatgaggtctgggacaccaaactcgcccggcacgccaag
gtgggcgcgctgctgcagcttgcggcgtacggggaccagctgctggggatgggcattgag
ccctcaccagtggtcacgctggtgctgggcacacgcataggtgaggactggctccgcagc
agccattcgcttccggacctgctgcctgttttccgcgaacggcggcgccgtttccgcgaa
ctggttgcgcaccacagggaggctggcgccacggtgaggtggcagcagccgggaatcgtc
cactgcggccggtgcgattactgcgccgagcaggtgcagctgcaccgggacctcctgatg
gtggcagggatgtcggtggtgcagcgaaagaaactgcacgccgccggcatcatcactatc
gacgaacttgcggcgatgcctgccggggacgcccggaattccgtggcccggctccggtcg
caggcccgaatgcagctggggctggacgccgtcgcgggctcccggacgttcaccaaggac
ggccagccgcacacagtcgcgttcactgtcctgcccgggaacaccatcgggtcactgccg
cctcccagccccggggacatcttcttcgacttcgagggagaccccctctggcaggatccc
gccaccggagcctggggcatcgaatacctgttcggagtggtcgaggcaccggctccaggc
caccacggcgacccggtgttccgcccgttctgggcgcactccaggtccggggagcgccgc
gccttcctggctttccttggctacgtggaggaacgccgggcacggtatccggacctgcac
gtctaccactacgcaccgtacgaaaagacggcactccgcaacctctcgctggcgcaccag
gccggggaggagacagtggacagctggctccgggaagggctgttggtggatctttacgcc
actgtccggcattcgctgcgcatttccgagccctcgtattccatcaagaaactggagccg
ctctatatgggcaacaacctgcgctcgggggacgtgacggacgcgggtgcctcggtggtg
gccaacgccgcctattgcgcggcccgcgatgccgggaacatggcggaagcggacaaggtc
ctggcgtccatctcggactacaaccgttacgactgcctgtccacgctccggctccgggac
tggctgcgcgaggtgggggcgcaggccgcagcggccgcagcgcccccggaacgccagggc
gcagccgaagggcagggcgctgccgaagggcagggcgctgccgaacgacggccagcgccg
gaacagcggcctgtccccgaggaaagtccggcggaggcccggctgcgcgggtacttggca
gatcttccggacaaccgcccctggaccgacgacgaacgcgccatcgcgatggtggccgcc
gccaccggctaccaccgccgcgagcgcaaacagttctggtggcagcacttcgaccgcgtg
gaagcaccgcttgagaactgggcggaccaacggaacgtgttcgtggtgtcctcggccgag
gtcacctccgactgggcgctggccaagccccgggagcgcatgcggacgcgggtactccgg
ctccggggcaccatgaccgaggggtccgatttccgcgcagactccacctggtgccggctc
tacgacgcaccgccgccggagggcatggccgccccggacgctgctcccggagcacgcgcc
tacgccttcgggacgaggatcagcgagcttgctccggcgcctgacgacccggagcacacc
atcgtcaccatcgccgagcgcgagtcggggaaggttgccgcctacccgcacctgcccgtg
gccctcaccgaggaccagccgctggccaccgcgagcatcgaagctgcgatcgcggagatc
gccgccaccgtcggagcgtccgttccttcgctcccggcgcaacccgggctggacatcctg
cgcaagcagcccccgcggttcagcaccctggccgggcccgtggacgtgccccacaacacc
gatggcagcgcggactacgctgcggccatcacggcgtccctccgggaccttgaccgttcc
taccttgccgtgcaggggccgccgggcacgggaaagacgtacgtcggggcccacgtcatc
ggccggctggtgaaagaaggctggaagatcggcgtggtgggccagtcgcacaacgtggtg
gagaacctgctctgccgcgccattgccgccggcggcgttgacccggcggcggtagccaag
aagctggcgtccccgcacgatgttccctggaagtccggcagggacggcgacgtcgcccgg
ctgcttgcgtcctccggcggctgcctggtgggcggaacggcgtggaccatgaccggcaag
gaagtccccgccggttccctggatctgctggtgatcgatgaagccgggcagttctcgctc
gccaacacccttgccgtttcccgggccgccaagcggctgctcctgctcggcgatccgcag
cagctgccacaggtcacccagggcgcgcacccggagcccgtggacgagtccgccctgggc
tggctggccgcgggacacgccaccctgcctgccagccttggctacttcctggccgacagc
tggcggatgcacccggaactgtgccgcgcagtttccgggctcagctacgaaggaaagctg
cagtccgccccggcagcatcgcagcggaaactcgaggagctgccacccggcgtcgaaacc
gtgttcgtggagcataccggcaacaccacagcgtccagggaagaggcggcggaggtggtc
cgccaggcacggcggcaccttgggctgaaatggacgccgggggcgcagggcgaggcacgg
cccctcgaccagcaggacctgctggtggtggccgcctacaacgcccaggtccacctggtc
cggaaaaccctggaggaagccgggctgccggatgtccgggtggggaccgtggacaagttc
cagggccaggaagcgcccgttgtactcgtatccatggcctgctccgccgtggccgaggcg
ccgcggggagctgagttcctgcttaacaggaaccggatcaatgtggccgtgtcacgcggg
caatggcgggccgtgatcatccgctcccccgagctcaccagctacatgccgcacaagccc
gccgcgctggaagagctgggcgccttcatcggcctcagcccgcgggattga
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