KEGG   Pseudarthrobacter oxydans: SMD14_06425
Entry
SMD14_06425       CDS       T09608                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pok  Pseudarthrobacter oxydans
Pathway
pok00061  Fatty acid biosynthesis
pok00071  Fatty acid degradation
pok01100  Metabolic pathways
pok01212  Fatty acid metabolism
pok02024  Quorum sensing
pok04146  Peroxisome
Module
pok_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pok00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SMD14_06425
   00071 Fatty acid degradation
    SMD14_06425
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SMD14_06425
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SMD14_06425
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pok01004]
    SMD14_06425
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pok04147]
    SMD14_06425
Enzymes [BR:pok01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SMD14_06425
Lipid biosynthesis proteins [BR:pok01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SMD14_06425
Exosome [BR:pok04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SMD14_06425
  Exosomal proteins of breast cancer cells
   SMD14_06425
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: WPU10631
LinkDB
Position
complement(1396697..1398526)
AA seq 609 aa
MREASTELLVELDAASNVTDLLLEQHEANPAHALYRRKGPNGWVDVTAHKFLQDVSALAK
GLIAGGLEPGDAVAVMSPTSYEWTLVDFAIWFAGGVTVPIYETSSARQVEWIIQDAGVRR
VFAGDRATVDLVTTVLEGSFLLRDRLVNVVRMDYDGEAPDLASLAAAGAGVTDAELERHR
SRAGLADVASLVYTSGTTGNPKGCEITHGNFALVAKNIVAFLPELLLQDQARTLMFLPLA
HVLARAVQVVCLAAGATLGHTPGAARLLEDLGTFRPTFLLVVPRIFEKVRATAAHKAALS
GKAWLFRAASATAIEFSQEEDKRNRGKGSGPGLLCRVRHGIFDRLLYPRLRQALGGQVGY
TVSGASPLALEDAHFFRGAGIPVLEGYGLTETTAPCTANTPSRTRVGSVGIPIPGTTIRV
AEDGEILVKGIGVFKGYHANQAANAEAFVDGFFRTGDLGELDPQGFLTVTGRKKDLLVTA
GGKNVAPGPLEEKIRSHPLVAHAVVVGDGKPFVSALVTLDPEGVDNWRSEQGLPALSASD
AIKDPDVLAAVQDAVDQANLLVSKAESVRSFSLLDAQFTVESGHLTPSLKLKRAAVVRDY
GDEIAKLYA
NT seq 1830 nt   +upstreamnt  +downstreamnt
gtgagagaagcgagcaccgaactgctggttgagcttgacgccgccagcaatgtgactgac
ctgctgctggagcagcatgaggccaaccctgcgcacgccctgtaccgcaggaaggggccc
aacggctgggttgacgtcacagcccacaagttcctgcaggatgtcagcgcgttggccaag
ggcctcatcgccggcggccttgagccgggcgacgccgtggccgtgatgtcccccacctcc
tacgaatggaccctggtcgatttcgcgatctggtttgccggcggtgtgacggtccccatc
tacgagacgtcctccgcacgccaggtggagtggatcatccaggacgccggcgtgcgccgc
gtctttgccggcgaccgggccacggtggacctggtcaccactgtgctcgagggctccttc
ctgctccgggaccggctggtcaacgtagtgcggatggattacgacggcgaagcaccggac
cttgccagcctcgccgctgccggcgcgggggttaccgacgcggagcttgagcggcaccgc
agccgggccggcctggcggacgtcgcctccctggtatacacgtcgggcaccacgggaaat
cccaagggctgcgagatcacgcacggaaacttcgccctggtggcgaagaacatcgtggcg
ttccttccggagctgctgctgcaggaccaggcccgcaccctgatgttcctgcccctggcc
cacgtccttgcccgtgccgtccaagtggtgtgcctcgccgccggggccactctgggccat
accccgggagccgcccggctccttgaggacctgggcacgttccggcccactttcctgctg
gtggtgccgcggatcttcgaaaaagtcagggccaccgccgcccacaaggctgccctctcg
ggcaaggcctggctcttccgggctgcatcggccacggccattgagttctcgcaggaagag
gataagcggaaccgcgggaagggcagcggccccgggctgctgtgccgggtgcgccatgga
atctttgaccggctgctgtatccccgccttcggcaggccctgggcggacaggtcgggtac
accgtatccggggccagtccgctggccctggaggacgcccacttcttccggggcgccggc
atcccggtactggaaggctacgggttaaccgaaaccacggcgccgtgcaccgccaacacc
ccgtcgcgtacccgggtgggctcagtggggatacccatccccggcaccaccatccgggtg
gcggaagacggtgaaatcctggtgaagggaattggcgtcttcaagggctaccacgccaac
caggccgcgaatgccgaggcttttgtggacggttttttccggaccggcgacctcggggaa
ctggatccgcaggggttcctcaccgtgacgggccgtaagaaggacctgctggtcactgcg
ggcggcaagaatgtggcaccgggccctctcgaggaaaagatccgttcccatccgctggtg
gcgcatgcggttgtggtgggcgatgggaaacccttcgtctcggcgctggtcaccctcgac
cccgagggcgtggacaactggcgttcggagcagggcctgcccgccctctcagccagcgac
gcgatcaaggacccggacgtcctcgcggcagtccaggatgcggtggaccaggcgaacctg
ctggtgtccaaagccgagtccgtccggagcttctcgctcctcgatgcccagttcacagtg
gagtcgggacacctgaccccgtccctcaaactgaagcgggccgccgtcgtgcgtgactac
ggcgacgagatcgccaagctgtacgcctga

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