Pseudarthrobacter oxydans: SMD14_07320
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Entry
SMD14_07320 CDS
T09608
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pok03016
]
SMD14_07320 (truB)
Enzymes [BR:
pok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMD14_07320 (truB)
Transfer RNA biogenesis [BR:
pok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMD14_07320 (truB)
Prokaryotic type
SMD14_07320 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Saf-Nte_pilin
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WPU10798
LinkDB
All DBs
Position
1612123..1613061
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AA seq
312 aa
AA seq
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MLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVVGINKATRLLTYI
VGTSKTYTATIRLGQTTVTDDAEGEVTATAGTSGVSEQAIHDGVAALTGDIQQVPSSVSA
IKVNGERAYARVRAGEDVKLAARPVTIHRFEVHGIRRDPEADVMDLDVTVECSSGTYIRA
LARDLGKALGVGGHLTALRRTHVGPYSLEQARTLEQLAEELNVLEMSQAARALMPNRELT
AEEATEISFGRRIAAGAAPGSPAAATADHPAAAFAPDGSLVALLADAGSFAKPVLVFAPG
NGSSATRTPGEG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgctttctggactggtgatagtggacaagccgcagggatggaccagccatgacgtggtt
ggccggatgcggcgcctcgcaggtacccggaaagtagggcacgccggaaccctcgacccc
atggccacgggcgtcctggtggtgggcatcaacaaggccacccggctgctcacctacatc
gtgggcacctccaagacctacaccgccaccatccggctgggccagaccaccgtcacggac
gacgccgaaggcgaagttactgccacggcaggcacttcgggggtcagtgagcaggcaatc
cacgacggcgtcgccgcgctcacaggcgacatccagcaggtgcccagcagtgtcagcgcc
atcaaggtcaacggtgaacgcgcctacgcccgggtgcgcgcgggtgaggatgtgaagctt
gccgcccgccccgtcaccatccaccgcttcgaggtgcacggcatccggcgggacccggaa
gcggacgtcatggacctggacgtcaccgtggagtgctcctccggaacctatatccgcgcc
ctcgcccgtgacctgggcaaggcgctgggagtgggcgggcacctgaccgcgctccgcagg
acccacgtgggcccgtactccctggagcaggcgcgcacgctcgagcagctcgccgaggaa
ctcaacgtcctggaaatgtcgcaggctgcccgggcactgatgcccaaccgtgagctgacc
gcggaggaagccaccgagatctccttcggccggaggatcgcggccggcgccgccccgggc
agtcccgcggcggccaccgccgaccacccggccgccgccttcgcaccggacgggagcctg
gtggcactgcttgccgatgccggcagcttcgccaagcccgtgctggtgtttgccccgggc
aacggcagctccgcaacccgcacccccggtgaaggctga
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