Pseudarthrobacter oxydans: SMD14_08295
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Entry
SMD14_08295 CDS
T09608
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pok03032
]
SMD14_08295
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_08295
Enzymes [BR:
pok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SMD14_08295
DNA replication proteins [BR:
pok03032
]
Prokaryotic type
DNA Topoisomerases
SMD14_08295
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMD14_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
WPU10975
LinkDB
All DBs
Position
complement(1834197..1836716)
Genome browser
AA seq
839 aa
AA seq
DB search
MARRQSPAPTVEDSTPYTENIVDIDVTSEMEGSFLEYAYSVIYSRALPDARDGLKPVQRR
ILYMMSDMGLRPDRGHVKSARVVGEVMGKLHPHGDTAIYDAMVRMAQDFSLRLPLIDGHG
NFGSLDDGPAAPRYTEARLAAAALTLTDHLDEDVVDFVPNYDNQLTQPDVLPAAFPNLLV
NGATGIAVGMATNMAPHNLVEVIAAARHLIANPDATLDDIMRFVPGPDLPSGGRIVGLDG
IRDAYATGRGSFKTRAKVEIEQLSARRTGLVVTELPYMVGPEKVIEKIKDAVNAKKLTGI
SDIVDLTDRKHGLRLVIELKNGFNPNAVLQQLYRYSPMEDSFGINNVTLVDGQPQTLGLV
QLLTVYVNHRIDVVRRRTVFRLGKKKDRLHLVEGLLIAIVDIDEVIQIIRSSDEAAAARA
RLMSIYDLTEIQANYILELRLRQLTKYSRIELEKEQDELRREIAELEAILGSEERLRTLV
SDELGAIAEEHGTPRRTVLLESEAVAPTVAADLALAAGKKGKAAPLALEIADDPCWAILT
ASGQVARTSNQEPLAEAGPRAKHDVYTSVVKTSARGEIAAVTSQGRMLRLQVMDMPVLPP
VSGLPNLAGGVPAKDFLTLLKGETLVAFVPLDEVLAIGTAQGVVKRVQPDYPLNREDWDV
ISLKDKDFVVNVVPAGADDAELVFLTSQAQLLKFGAASVRPQGRTAGGMAGIKLASGDRV
LYFGAIQPKDEAAVVVTIAGTTGALPGTAPGTAKVTAFSEYPVKGRATAGVRAHRFLKGE
DTLLLAWAGHGPAKASSAAGVARSLPQEHGRRDGSGVPLSQPVDVVGPAMAWPDPAQTA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgccaaagcccagcccccaccgtggaagacagcaccccctacacggaaaac
atcgtggacatcgatgtcacctccgaaatggaggggtccttcctggagtacgcgtattcg
gtgatttactcgcgggcccttcccgacgcccgcgacgggctcaagccggtgcagcgccgc
atcctctacatgatgagcgatatgggcctgcgccccgaccgcggccacgtgaagagcgcc
cgcgtggtgggcgaggtcatgggaaagctgcacccgcacggcgataccgccatctacgac
gccatggtgcgcatggcgcaggacttctcgctgcggctgcccctcattgacgggcacggc
aacttcggctcgctcgacgacggccctgcggctccgcggtatacggaagcacggctggcc
gccgccgccctcaccctcaccgaccacctcgatgaagacgtggtggactttgtccccaac
tacgacaaccagctgacccagccggacgtcctgccggcagcgttccccaacctgctggtc
aacggtgccaccggcatcgccgtcggcatggccaccaacatggccccgcacaacctcgtg
gaagtcatcgcggccgcgcggcacctgattgccaacccggacgcgacgctggatgacatc
atgcgcttcgtgcccggcccggacctgcccagcggcgggcgcatcgtgggcctggacggc
atccgcgacgcctacgccaccgggcgggggtccttcaagacccgggccaaggtggaaatc
gagcagctttccgcgcgccggactggcctggtggtcaccgagctcccctacatggtgggc
ccggagaaggtcatcgagaagatcaaggacgccgtcaatgccaagaagctgaccggcatc
agcgacatcgtcgacctgacggaccggaagcacggcctgcggctggtcatcgaactgaag
aacggcttcaaccccaacgccgtcctccagcagctctaccgctactcgccgatggaggac
tccttcggcatcaacaatgtcaccctggtggacgggcagccgcagaccctgggcctggtg
cagctgctcaccgtctacgtgaaccaccggatcgacgtggtgcgccgccggaccgtcttc
cggctgggaaagaagaaggaccgcctccacctggtggagggcctcctcatcgccattgtg
gacatcgacgaagtcatccagatcatccggtcctcggatgaggccgccgccgcccgggcc
cggctgatgtccatctacgacctcacggaaatccaggcgaactacatcctggaactgcgc
ctccgccagctgaccaagtactcccggatcgagctcgagaaggaacaggacgagctccgc
cgcgagatcgcggagctggaggccatcctgggctcagaggaacggctgcgcacgctggtg
tccgacgaactgggcgccatcgccgaagagcacggcacgccgcggcggacggtcctgctg
gaatcagaggctgtggcccccaccgttgccgccgacctcgccctggccgcgggaaagaag
ggcaaggccgcgccgctggccctggaaatcgccgacgacccctgctgggcaatcctgacc
gcgtccgggcaggtggcccgcaccagcaaccaggagccgctggcggaggccggcccccgg
gccaagcacgatgtatacacgtccgtggtcaagacctcggcgcggggcgaaatcgctgcg
gttacctcgcaggggcgcatgctgcgcctccaggtgatggacatgccggtcctgcccccg
gtctcgggcctgccgaacctcgccggcggggttcccgccaaggatttcctgaccctcctg
aagggggagaccctggtggcgttcgtcccgctggacgaagtgctggccattggcactgcc
cagggagtggtgaagcgggtgcagccggactatccgctgaaccgggaagactgggacgtc
atttccctgaaggacaaggactttgtggtcaacgtggtgcctgcgggagccgatgatgcc
gagctggtgttcctgaccagccaggcgcagctgctgaagtttggtgccgcaagcgtgcgg
ccgcagggccgtacggccggcggcatggcaggcatcaagctggcgtccggggaccgtgta
ctgtacttcggcgccatccagcccaaggacgaggccgccgttgtggtgaccatcgcggga
accaccggcgcgcttcccggcaccgcccccggcacagccaaggtgaccgcgttctccgag
tatccggtgaaggggcgtgcgacagccggagtgcgggcccaccgcttcctgaagggcgag
gacacgctgctgctcgcctgggcaggccacggcccggccaaggcgtcctcggcagccggg
gtcgccaggtccctgcctcaggagcatggccggcgtgacggatccggcgtcccgctctcc
cagccggtggatgtggtgggtcccgccatggcctggcctgatcccgcccagactgcctga
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