KEGG   Pseudarthrobacter oxydans: SMD14_09650
Entry
SMD14_09650       CDS       T09608                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pok  Pseudarthrobacter oxydans
Pathway
pok03030  DNA replication
pok03410  Base excision repair
pok03420  Nucleotide excision repair
pok03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SMD14_09650 (polA)
   03410 Base excision repair
    SMD14_09650 (polA)
   03420 Nucleotide excision repair
    SMD14_09650 (polA)
   03440 Homologous recombination
    SMD14_09650 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pok03032]
    SMD14_09650 (polA)
   03400 DNA repair and recombination proteins [BR:pok03400]
    SMD14_09650 (polA)
Enzymes [BR:pok01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SMD14_09650 (polA)
DNA replication proteins [BR:pok03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SMD14_09650 (polA)
DNA repair and recombination proteins [BR:pok03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SMD14_09650 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SMD14_09650 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: WPU11357
LinkDB
Position
2131724..2134366
AA seq 880 aa
MAFRAFFALPADKFSTTNGQHTNAIHGFTSMLINLIKEQQPTHIAVAFDVSDESTHRKTE
YSEYKGGRNETPREMNNQIDLIAQVMKAWGIKTITMPGYEADDILATLATMGEKAGYEVL
LVSGDRDAFQLITDNVFVLYPRKGVSDIPRMDAAAIEAKYFVSPSRYSDLAALVGETADN
LPGVPGVGPKTAAKWINLYGGLDGVLEHLDAIGGKVGDALRENVEAVKRNRRLNQLHTDL
ELPVTLDDLYQPRPDQAALEDLFDKLEFKTIRSRLFALYGDADKPAAERESIDTPQYVVP
GSAAELSAFLDAGAGQRSAVSVDLVPGRIGEDAAALAIVRDGAAAYVDLSSQDAESENVL
AGWLRDPEAPKVLHGFKAALKALTSRGLELEGVVDDTSISGYLIQPDRRTYELAELAQHH
LNVGIPAATAKAGQLELSFDGEDDAAADALVQAAAVVLALSRYFEDELKERKAEELLSTL
ELPVSRVLADMELAGIAIDMARMDDQIADLARVIDQAQEQAFAAIGHEVNLGSPKQLQTV
LFEELQLPKTKKIKSGYTTDAASLKNLLEKTGHEFLVQLMAHREAAKLSQMLESLKKSVA
EDGRIHTTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVGEGYECLLSADYSQI
EMRIMAHLSGDQGLIQAYRDGEDLHRFVGSNIFHVPTEEVTSAMRSKVKAMSYGLAYGLT
SFGLSKQLEISVDEARTLMKDYFDRFGAVRDYLRGVVDQARIDGYTATIEGRRRYLPDLT
STDRQLRENAERIALNSPIQGSAADIIKRAMLGVHAELKAQGLKSRMLLQVHDELVLEVA
AGERAAVEKLVTEQMAAAADLSVPLEVQIGVGPSWYDAGH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggcattccgcgcgttttttgcgctgcccgcggacaagttctcaaccacgaacgggcag
cacaccaacgccattcacggattcacctccatgctgatcaacctcatcaaggagcagcag
cccacccacatcgcggtggccttcgacgtttcggacgagtccacccaccgcaagacggag
tacagcgaatacaagggtggccgcaacgagactccgcgggagatgaacaaccagatcgac
ctcattgcgcaggtcatgaaggcctggggcatcaagaccatcacaatgcccggctacgag
gcagatgacattcttgccaccctcgccaccatgggagaaaaagcagggtacgaagtgctg
ctggtctcgggggaccgcgatgcgttccagctcatcaccgacaacgtttttgtgctgtac
cccaggaagggcgtcagcgacattccgcggatggatgccgctgccattgaggcgaagtac
ttcgtcagccccagccggtactcggatcttgctgcgctggtgggcgaaacggcggacaac
cttcccggcgtgcccggggtcgggcccaagacggccgccaagtggatcaatctttacggc
gggctcgacggcgtcctggagcacctggatgcgattggcgggaaggtgggcgatgcgctg
cgcgaaaacgtcgaggccgtcaagcggaaccgccgcctgaaccagctgcacacggacctt
gagcttcccgtcacgctggatgacctttaccagccgcggccggaccaggccgccctggag
gacctgttcgacaagcttgagttcaagaccatccgcagccggctctttgcgctctacggc
gatgcggacaagcctgccgcggaacgggaaagcatcgacacgccgcagtacgtcgtgccg
ggcagtgccgcggagctgtcagcgttcctcgacgccggcgcggggcagcgctccgccgtc
tccgtcgaccttgtccccggccgcatcggcgaggacgccgcggcgctggcgattgtccgg
gacggcgctgccgcctatgtcgacctgtcaagccaggacgccgagtcggagaacgtcctg
gccggctggctgcgggacccggaagcgccgaaggtcctgcacggtttcaaggccgcactg
aaagccctgacgtcccgtggactggagctggaaggcgtggtggatgacacgtccatctcc
ggttacctcatccagccggaccggcgcacctacgaactcgcggagctggcccagcaccac
ctcaacgtggggatccctgccgccacggccaaggcaggccagctagagctctccttcgac
ggcgaggacgacgccgcagccgacgcgctggtccaggcggccgccgtcgtgctggccctg
agccgctacttcgaggacgaactcaaggagcgcaaggcggaggaactgctctccaccctc
gagctgccggtcagccgtgtcctcgccgacatggagctcgccggcattgccattgacatg
gcgcgcatggatgaccagatcgccgatctggcccgggtcatcgaccaggcgcaggagcaa
gcgttcgcggcgatcgggcatgaggtgaacctgggctctcccaaacagctccagactgtc
ctgttcgaggaactccagttgcccaagaccaagaagatcaagtcgggctacaccacggac
gccgcatctttgaagaacctgctggaaaagacggggcacgagttcctggtgcagctgatg
gcgcaccgggaggccgccaagctgagccagatgctcgaatccctgaagaagtccgtggcc
gaggacggccgcatccacaccacctacgcccagaatgtggcagcgacaggccggatctcc
tccaacaacccgaacctgcagaacatccctatccgcagcgaggaaggccggcgggtccgc
gggatcttcgtggtgggggagggctatgagtgcctgctgtccgccgattattcccagatc
gaaatgcgcatcatggcccacctgtccggtgaccagggcctgatccaggcctacagggac
ggtgaggacctgcaccggttcgtcggctcgaacatcttccatgtgcccaccgaagaggtc
accagcgccatgcgctccaaggtgaaggcaatgtcctatggcctggcctatggcctgaca
tcgttcggcctgtccaagcagctggagatctccgtcgatgaggcacggaccctcatgaag
gactacttcgaccggttcggcgctgtccgcgactacctccgcggcgtggtggaccaggcc
cgcattgacgggtacaccgcaaccatcgagggacgccggcgctacctgccggacctcacc
agcacggacaggcaactccgggagaacgccgagcggattgccctgaacagtcccatccag
ggctcggccgcggacatcatcaagcgcgccatgctgggagtccacgccgagttgaaagcc
caagggctgaaatcacggatgctgctccaggtccacgacgaactggtcctggaagtggca
gccggtgagcgcgcggccgtggagaagctggttaccgagcagatggccgccgccgcggac
ctgagcgtcccgctggaggtccagatcggcgtcggccccagctggtacgacgccggccac
tag

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