Pseudarthrobacter oxydans: SMD14_10510
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Entry
SMD14_10510 CDS
T09608
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok03030
DNA replication
pok03430
Mismatch repair
pok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMD14_10510 (holA)
03430 Mismatch repair
SMD14_10510 (holA)
03440 Homologous recombination
SMD14_10510 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pok03032
]
SMD14_10510 (holA)
03400 DNA repair and recombination proteins [BR:
pok03400
]
SMD14_10510 (holA)
Enzymes [BR:
pok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMD14_10510 (holA)
DNA replication proteins [BR:
pok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMD14_10510 (holA)
DNA repair and recombination proteins [BR:
pok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMD14_10510 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WPU07632
LinkDB
All DBs
Position
complement(2320491..2321507)
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AA seq
338 aa
AA seq
DB search
MAAAQKRATRSPASNAASWRDVKPAAVVLVSGPEEYLGIRAMDHIRAQVRATAPDVEVSR
INAAAYEPGTLLMQVSPSLFGESKLIEVEAVEAMNDAFLADALRYVEHTEPDAVLVLRHG
GGVRGKKLLDAIKKDGWPVVDCQPLKKDADKVAFVAAEFKAGGRRIEQDAVQALVNAVGA
NLSELAAACSQLIADAGTTVTSDIVDRYYGGRIEATAFKVADAAMAGNAPLALSTLRHAL
ATGADPVPLVAALAAKLRTVARVAGASGSSGQIAAELGMQPWLVEQAQRDVRRWTPDGLV
RSIQATAEADAQVKGLSRDPVYAVEHAVTVIAMSVQGR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcgcagaagcgagcaacccgttccccggcatcgaatgcggcctcctggcgg
gatgtaaagcccgctgcggtggtgctggtcagcggcccggaggagtacctgggcatcagg
gccatggaccacatccgtgcccaggtccgggcaacagccccggacgtggaggtcagccgc
atcaatgcggccgcgtacgagcccggcaccctgctgatgcaggtcagcccgtcgctgttc
ggcgaaagcaagctcatcgaggtcgaagctgtcgaggccatgaacgacgccttcctcgct
gacgcgcttcggtacgtagaacatacggaaccggatgccgtccttgtcctgcggcacggc
gggggagtccgtgggaagaaactcctggacgcaatcaagaaggacggctggcccgtggtg
gactgccagcccctcaagaaagacgcagacaaggtggccttcgtggcggccgagttcaag
gccggcggccgccgtattgagcaggacgcggtgcaggccctggtcaacgctgtcggcgca
aacctctcggaacttgcggcggcgtgcagccagctcatcgccgatgccgggaccaccgtg
acttcagatattgtggaccgctactacggtggacgcattgaagcgacggcgttcaaggtg
gcggacgcggcaatggccggcaacgctcctttggccctgtccacgctccgtcatgccctc
gccacgggagcagaccccgtcccgcttgttgccgcgctggccgcaaaactccgtaccgtg
gcccgcgttgccggtgcgtcgggctcctctggccagattgccgcggaactgggcatgcag
ccctggctggtggagcaggcgcagcgcgacgtccgccggtggaccccggatggcctggtc
aggtccatccaggccacggccgaggcggacgcgcaggtcaaggggctttcgcgtgatcct
gtgtatgcagtggagcatgcggtcacggtgatcgccatgtcggtccagggccgctga
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