Pseudarthrobacter oxydans: SMD14_11010
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Entry
SMD14_11010 CDS
T09608
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pok
Pseudarthrobacter oxydans
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pok03016
]
SMD14_11010
Enzymes [BR:
pok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SMD14_11010
Transfer RNA biogenesis [BR:
pok03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SMD14_11010
Prokaryotic type
SMD14_11010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
WPU11373
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All DBs
Position
complement(2433137..2434168)
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AA seq
343 aa
AA seq
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MRDLTILGTASQVPTRTRNHNGYLLRWDGEGFLFDPGEGTQRQMIHAGIPASQITRICLT
HVHGDHCFGLPGVLSRMALDGVAHPIHLHYPLSGEDVVRALVSVSSPGIDLRLRPHGGSG
TVAEGLDVRPLKHRIETYGYRLVEPDGRTLLPERLAAAGISGPAIGRLQHEGSLAGVRLD
DVSIPRPGQRFAFVMDTAPCEGAEELADGVDLLVAESTFSDDDGGLARQYRHLTAGQAGE
LAAGAAARTLVLTHFSSRYGEDAAPLAVQARARAADTDVIAAQDLQRVPMPRRRRWPGHG
VTAPERSTAPERTALPGHAIPRAGEVTDELINGRTSDGDRVNP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacctcaccatcctcggtacggcctcccaggtccccacccggaccaggaaccac
aacggctacctgctccgctgggacggggaaggtttcctctttgacccgggcgagggcacg
cagcgccaaatgatccacgcggggatcccggcgagccagataacccgcatttgcctcacc
cacgtccacggagaccattgttttggtctgccgggggtgttgtcgcggatggccctggac
ggggtggcgcaccctatccatcttcactacccgttatccggggaagacgtggtgcgcgcc
ctcgtgtctgtcagttcaccgggaatcgacctcaggcttcgcccccacggcggaagcggg
acggtggccgaaggccttgacgtccggccgctgaagcaccgcattgagacctacggctac
cggctggtggaaccggacggccgcacgctgctgcctgaacgccttgccgcggcaggaata
tcgggccccgcgatcgggcgcctgcagcatgaaggcagccttgcgggcgtccgcctcgat
gatgtcagcattccgcggcccggccagcgcttcgctttcgtaatggacacggcgccctgc
gagggcgccgaggagctggccgacggcgtcgacctcctcgttgcggagtccaccttcagc
gatgacgacggcgggctggcgcgccagtaccgtcacctcaccgccgggcaggcaggggaa
ctggcagcgggggcagccgcccgaaccctcgtgctgacgcacttctcctcacggtacggc
gaggacgccgcgccgctcgcggtccaggccagggcccgtgcggcggatactgacgtcatc
gccgcgcaggacctgcaacgcgtccccatgccccggcggcgccgctggccggggcatggc
gtcacggcaccggaacggtccactgcacctgaacggaccgctctgccaggccatgccatt
cctcgagccggggaggtcaccgatgagctcatcaacggccggacaagcgacggcgatagg
gttaacccatga
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