Pseudarthrobacter oxydans: SMD14_12090
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Entry
SMD14_12090 CDS
T09608
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pok
Pseudarthrobacter oxydans
Pathway
pok02024
Quorum sensing
pok03060
Protein export
pok03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SMD14_12090 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SMD14_12090 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMD14_12090 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pok02044
]
SMD14_12090 (ffh)
Enzymes [BR:
pok01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SMD14_12090 (ffh)
Secretion system [BR:
pok02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SMD14_12090 (ffh)
Eukaryotic Sec-SRP protein
SMD14_12090 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
APS_kinase
nSTAND3
AAA_30
Zeta_toxin
cobW
Thymidylate_kin
AAA_16
AAA_18
NPHP3_N
6PF2K
Mg_chelatase
ATP_bind_1
DUF285
MeaB
MobB
NB-ARC
AAA_31
TsaE
AAA_33
DUF6596
TAF4
GT-D
Chlamy_scaf
Motif
Other DBs
NCBI-ProteinID:
WPU07921
LinkDB
All DBs
Position
complement(2677470..2679053)
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AA seq
527 aa
AA seq
DB search
MFNSLSDRLTATFKNLRGKGRLSEADVDATVREIRRALLDADVAVPVVREFTGRVRERAL
GSEVSGALNPSQQIVKIVNEELVEILGGETRRIRLAKNGPTIIMLAGLQGAGKTTLAGKL
SKWLKAQGHSPMLVACDLQRPNAVTQLQVVGQRAKVPVFAPHPGATSSELEHPAGDPVAV
ARAGVEEARQKLHDVVIVDTAGRLGVDADMMEQARQIRRAIVPNEVLFVIDSMIGQDAVN
TALAFDEGVNFTGIVLSKLDGDARGGAALSVASVTGKPVMFASTGEGLDDFELFHPDRMA
SRILDMGDVLTLIEQAEKSWDKDEAARMAKKFADQEDFTLEDFLAQMQQIRNMGSMKKML
MMMPGAQNIRQQLEQFDEREIDRVEAIVRSMTPHERVAPKIINGSRRARIARGSGVHVSE
VNGLLERFAQAQKMMKKMAQGGMPGMPGMPGMPGAGGGARKNAKNAPKKKAKSGNPAKAA
QERKDAEARRANAAKALPTGAAFGQQPGDFDPSQLNLPKGFDKFLGK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaattcactctctgaccggttgacagcaacctttaagaatctgcggggtaaaggc
aggctctccgaggccgacgtcgatgccacagtccgcgagatccgccgtgccctcctggat
gccgacgttgccgttccagttgtccgtgaattcaccggccgggtacgggaacgcgccctg
ggttccgaggtgtccggtgcgctgaacccgagccagcagatcgtcaagatcgtcaacgaa
gaactggtggagatcctcggcggtgaaacccgccggatccgcctcgccaagaacggcccc
accatcatcatgctggctggcctccagggtgccggtaagaccaccctcgccggcaagctg
tccaagtggctgaaggcccagggccacagccccatgctggtggcatgcgacctgcagcgc
cccaacgcggtcacccagctccaggtggtgggccagcgcgccaaggtgccggtgttcgcg
ccgcacccgggagccacgtcctccgaactcgagcaccctgccggcgaccccgtggccgtt
gcccgcgccggtgtggaggaagcccgccagaagctgcacgacgtcgtcatcgtggacacc
gccggccggctcggtgtcgacgccgacatgatggagcaggcgcgccagatccgccgcgcc
atcgtgcccaacgaagtcctcttcgtcatcgactccatgatcggccaggacgccgtgaac
acggcgctcgccttcgatgagggcgtcaacttcacgggcatcgtgctctccaagctcgac
ggcgacgcccgcggcggtgccgcgctctcggtggcgtccgtcaccggcaaacccgtcatg
ttcgcctccaccggcgaaggccttgacgacttcgagctgttccacccggaccggatggca
tcgcgcatcctggacatgggtgacgtcctgacgctgattgagcaggcggagaaatcctgg
gacaaggacgaagccgcccggatggcgaagaaattcgccgaccaggaagacttcaccctt
gaggacttcctggcccagatgcagcagatccgcaacatgggctcgatgaagaaaatgctc
atgatgatgccgggtgcgcagaacatccgccagcagctggagcagttcgacgaacgcgag
atcgaccgcgtcgaggccatcgtccggtccatgaccccgcacgagcgtgttgcgcccaag
atcatcaacggctcccgccgcgcccgtattgcccgcggctccggcgtccacgtctccgag
gtcaacggccttctggagcgcttcgcccaggcccagaagatgatgaagaagatggcccag
ggcggcatgccggggatgcccgggatgccaggcatgccgggtgccggcggcggggcgcgg
aagaacgccaagaacgcccccaagaagaaggcgaagtcaggcaaccccgccaaggctgcc
caggagcggaaggacgccgaggcccgccgggccaacgcggccaaggctctgccgaccggc
gccgccttcggccagcagccgggcgacttcgatccgtcccagctgaacctgcccaagggc
ttcgacaagttcctcggcaagtaa
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